Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_G10
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35 pro... 124 1e-28
CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein. 124 1e-28
BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35 p... 124 1e-28
BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35 p... 124 1e-28
BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35 p... 124 1e-28
AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35 p... 124 1e-28
BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein. 123 3e-28
AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35 p... 59 7e-09
AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35 p... 48 2e-05
BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein. 32 0.74
BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein. 32 0.74
AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens ... 32 0.74
AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein. 32 0.74
AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein. 32 0.74
BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein. 31 1.7
AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein. 31 1.7
AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal... 31 1.7
AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal... 31 1.7
AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal... 31 1.7
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 30 3.0
>U12465-1|AAA51648.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>CR456877-1|CAG33158.1| 123|Homo sapiens RPL35 protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC094828-1|AAH94828.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC071915-1|AAH71915.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC000348-1|AAH00348.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>AL354928-8|CAI39639.1| 123|Homo sapiens ribosomal protein L35
protein.
Length = 123
Score = 124 bits (299), Expect = 1e-28
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAVKA
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123
>BC010919-1|AAH10919.1| 123|Homo sapiens RPL35 protein protein.
Length = 123
Score = 123 bits (296), Expect = 3e-28
Identities = 61/95 (64%), Positives = 72/95 (75%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYKNKKYKPLDLXAKKT 228
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK KKYKPLDL KKT
Sbjct: 29 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKT 88
Query: 229 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 333
RAMR+ L KHE +KT+K+ RK+ L+P R YAV+A
Sbjct: 89 RAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVRA 123
>AL354928-7|CAI39638.1| 95|Homo sapiens ribosomal protein L35
protein.
Length = 95
Score = 58.8 bits (136), Expect = 7e-09
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = +1
Query: 49 TNLRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQKXKVNLRNHYK 186
+ LRVAKV GG ASKLSK+RVV K+IARV V +Q K NLR YK
Sbjct: 28 SQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73
>AB046409-1|BAB21255.1| 33|Homo sapiens ribosomal protein L35
protein.
Length = 33
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +1
Query: 55 LRVAKVXGGVASKLSKLRVVSKAIARVYIVYHQ 153
LRVAKV GG ASKLSK+RVV K+IARV V +Q
Sbjct: 1 LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33
>BC107597-1|AAI07598.1| 417|Homo sapiens LOC130940 protein protein.
Length = 417
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 166 NLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+++N +N KYKP+D + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>BC015395-1|AAH15395.1| 255|Homo sapiens LOC130940 protein protein.
Length = 255
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 166 NLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+++N +N KYKP+D + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AK058105-1|BAB71668.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ25376 fis, clone TST02010. ).
Length = 255
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 166 NLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+++N +N KYKP+D + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AF458588-1|AAM49716.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 166 NLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+++N +N KYKP+D + K L AK+K RK + L
Sbjct: 14 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 59
>AC019044-1|AAX88983.1| 361|Homo sapiens unknown protein.
Length = 361
Score = 32.3 bits (70), Expect = 0.74
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 166 NLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+++N +N KYKP+D + K L AK+K RK + L
Sbjct: 5 HMKNEMRNIKYKPVDYQQLRALTEAKKLASASAKLKIRKAMLTSKL 50
>BC052806-1|AAH52806.1| 128|Homo sapiens MRPL55 protein protein.
Length = 128
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 85 ASKLSKLRVVSKAIARVY---IVYHQKXKVNLRNHYKNKKYK-PLDLXAKKTRAMRKALT 252
+S+ S RV +A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 253 KHEAKIKTRKEIRKK 297
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>AY358771-1|AAQ89131.1| 164|Homo sapiens AAVG5835 protein.
Length = 164
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 85 ASKLSKLRVVSKAIARVY---IVYHQKXKVNLRNHYKNKKYK-PLDLXAKKTRAMRKALT 252
+S+ S RV +A AR+Y +V +++R + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 253 KHEAKIKTRKEIRKK 297
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-5|CAI23117.1| 164|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 164
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 85 ASKLSKLRVVSKAIARVY---IVYHQKXKVNLRNHYKNKKYK-PLDLXAKKTRAMRKALT 252
+S+ S RV +A AR+Y +V +++R + P+DL R L
Sbjct: 71 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 130
Query: 253 KHEAKIKTRKEIRKK 297
K EA++++RKE ++
Sbjct: 131 KREAQLQSRKEYEQE 145
>AL136379-4|CAI23118.1| 125|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 125
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 85 ASKLSKLRVVSKAIARVY---IVYHQKXKVNLRNHYKNKKYK-PLDLXAKKTRAMRKALT 252
+S+ S RV +A AR+Y +V +++R + P+DL R L
Sbjct: 32 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 91
Query: 253 KHEAKIKTRKEIRKK 297
K EA++++RKE ++
Sbjct: 92 KREAQLQSRKEYEQE 106
>AL136379-3|CAI23116.1| 128|Homo sapiens mitochondrial ribosomal
protein L55 protein.
Length = 128
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +1
Query: 85 ASKLSKLRVVSKAIARVY---IVYHQKXKVNLRNHYKNKKYK-PLDLXAKKTRAMRKALT 252
+S+ S RV +A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 253 KHEAKIKTRKEIRKK 297
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 30.3 bits (65), Expect = 3.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 148 HQKXKVNLRNHYKNKKYKPLDLXAKKTRAMRKALTKHEAKIKTRKEIRKKSL 303
+QK ++ + +N+K K LD K+ + KAL KI TR + ++ L
Sbjct: 850 YQKIQLQRKLREENEKRKQLDAVIKRDQQKIKALNTDSLKISTRLNLLEQEL 901
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,311,466
Number of Sequences: 237096
Number of extensions: 596189
Number of successful extensions: 1667
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1666
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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