Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G05
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   0.82 
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   1.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   7.7  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 349 CSLLYHTSKNQTCI*PHNY 293
           C   YH  K++ CI P++Y
Sbjct: 109 CEYAYHLKKDEVCINPYHY 127


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -2

Query: 399 LRKLMCSSQPYKVRTNSAVYCITLPKIKHVFDHITIFYNT 280
           +R+    +  YK  T  A+YC  +PK  +   ++   Y+T
Sbjct: 561 IRRPQVHASAYKQVTGEAIYCDDIPKFANEL-YLAFVYST 599


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 135 VNQLIIHNYFKRPYNKIVTLFI*NRHN 55
           +N L  H +FK+ Y K+  L +   HN
Sbjct: 271 LNHLANHFFFKKDYQKVQHLALHAFHN 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,225
Number of Sequences: 2352
Number of extensions: 12100
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)