Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_G03
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical...    31   1.2  
AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical ...    31   1.2  
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.2  
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ...    31   1.2  
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AL132949-23|CAB70113.2|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.26 protein.
          Length = 152

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 692
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AL132949-6|CAB70102.1|  152|Caenorhabditis elegans Hypothetical
           protein Y53F4B.7 protein.
          Length = 152

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 692
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
           protein ZK250.9 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 692
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
           protein Y16E11A.2 protein.
          Length = 1466

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 692
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
           protein F59H6.5 protein.
          Length = 1486

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +3

Query: 570 MSTRQRSRTLNKDS-PIWKTRTKIGDSQRRTKATTMMDWTVK 692
           +S R RSRTL+ +S  +WK   +  ++ + +++   MDW  K
Sbjct: 43  VSRRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERK 84


>Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical
           protein C34C6.5b protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +3

Query: 567 VMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWTVKDRSHSIRLG 719
           V S  +++     D    KT   + DS+  T  T   +WT+ D   ++ +G
Sbjct: 250 VFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWTLPDSDETLAVG 300


>Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical
           protein C34C6.5a protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +3

Query: 567 VMSTRQRSRTLNKDSPIWKTRTKIGDSQRRTKATTMMDWTVKDRSHSIRLG 719
           V S  +++     D    KT   + DS+  T  T   +WT+ D   ++ +G
Sbjct: 300 VFSVYEKTTQQRIDDSKVKTNGSVSDSEEETMETKFQNWTLPDSDETLAVG 350


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 332 NRHRRRRWQLNYGYDYQPPRHYTERRDYYQNQQ 430
           NR+   RW  N   DY  PR+Y+ R  + +NQ+
Sbjct: 600 NRNYDERWSRN---DYSNPRNYSNRSFHQRNQR 629


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,164
Number of Sequences: 27780
Number of extensions: 253839
Number of successful extensions: 638
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)