Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F24
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 104 1e-21
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 103 3e-21
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 101 6e-21
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 92 6e-18
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 1e-07
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 58 1e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 9e-07
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 50 3e-05
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 37 0.26
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.34
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 34 1.8
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 34 1.8
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 5.5
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 7.3
UniRef50_Q8YLH8 Cluster: Alr5320 protein; n=2; Nostoc|Rep: Alr53... 31 9.7
UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 104 bits (249), Expect = 1e-21
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +1
Query: 85 GRTAKNVNATKYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 264
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 265 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 372
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 103 bits (246), Expect = 3e-21
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +1
Query: 115 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 288
K T+Y K + + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 289 VRSQVALKRCKHFELGGDKKRKGQMIQF 372
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 101 bits (243), Expect = 6e-21
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +1
Query: 115 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 288
K T+Y K + + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 289 VRSQVALKRCKHFELGGDKKRKGQMIQF 372
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 91.9 bits (218), Expect = 6e-18
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 97 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 270
K+ K+T + T K + + +RRYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 271 ECADCKVRSQVALKRCKHFELGGDKKRKG 357
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 58.0 bits (134), Expect = 1e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 145 PRKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 321
P K +L + +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 322 HFEL 333
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +1
Query: 172 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 351
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 352 K 354
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 9e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +1
Query: 256 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 357
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 50.0 bits (114), Expect = 3e-05
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 172 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 318
+RRYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 22 KRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 43.6 bits (98), Expect = 0.002
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +2
Query: 164 PGXEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RDASTLSLVVT 343
P D ++ VTVV P+ SS RR +P R+L SV S L AR DAST S VVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 344 R 346
R
Sbjct: 102 R 102
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.7 bits (81), Expect = 0.26
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 130 HSTKSPRK---GTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQ 300
HS + RK L +RR+ R GYGG +P F I LRL C +C
Sbjct: 20 HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79
Query: 301 VALKRCKHFEL 333
R K FE+
Sbjct: 80 PPGIRAKKFEI 90
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.34
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 304 ALKRCKHFELGGDKKRKG 357
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 33.9 bits (74), Expect = 1.8
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 175 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFE 330
RR+ ++GYGGQ P + L C DCK + R K FE
Sbjct: 38 RRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYGLRVKKFE 89
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 33.9 bits (74), Expect = 1.8
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 139 KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 318
++ ++ + RRY RKQ+GYG Q +P VL + C C + R
Sbjct: 26 RAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRL 85
Query: 319 KHFEL 333
K EL
Sbjct: 86 KRLEL 90
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 5.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 141 FCTVIPCVLCGIYIFCSTSC 82
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 7.3
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 368 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 261
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_Q8YLH8 Cluster: Alr5320 protein; n=2; Nostoc|Rep: Alr5320
protein - Anabaena sp. (strain PCC 7120)
Length = 192
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 223 WVWTDHRNPAVYDH--NVFXPWAACLSLDFLYCDTLCTLWHLHFLQYVL 83
WVW P +YD + + +A L+L FL + L+ H L Y++
Sbjct: 75 WVWNLFGKPGLYDEIVHAYTTFAITLALSFLVYSPMLNLFRNHTLLYLV 123
>UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 226
Score = 31.5 bits (68), Expect = 9.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 164 PGXEDVMIVNSRVTVVSPNPSSKR 235
PG ED+ I N V V+ P P +KR
Sbjct: 95 PGDEDIQIDNGNVEVIDPQPKTKR 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,894,775
Number of Sequences: 1657284
Number of extensions: 6499619
Number of successful extensions: 16620
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16611
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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