Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F22
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1548 + 27630988-27631049,27631632-27631767,27631904-276320... 32 0.37
11_06_0231 + 21531169-21531674,21533607-21533681,21535426-21535741 31 0.64
04_04_1290 + 32399905-32399972,32400502-32400571,32400950-324017... 31 1.1
01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296 30 1.5
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953... 29 2.6
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 2.6
05_01_0564 - 4919294-4919391,4919491-4919620,4919700-4919789,491... 29 3.4
11_06_0233 + 21565233-21566053,21566840-21567890,21568075-215687... 29 4.5
08_02_1185 + 25016146-25016422,25017201-25017443,25017551-250176... 29 4.5
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 4.5
02_05_0825 - 32042128-32042238,32042905-32043246,32043548-32043727 29 4.5
01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,260... 29 4.5
08_01_0768 + 7408004-7408159,7409101-7409297,7427823-7428206,742... 28 6.0
07_01_1203 - 11464142-11464324,11464422-11464484,11464685-114665... 28 6.0
03_02_0772 - 11051657-11052919 28 6.0
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 28 7.9
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 28 7.9
>07_03_1548 +
27630988-27631049,27631632-27631767,27631904-27632041,
27632168-27632267,27632443-27632552
Length = 181
Score = 32.3 bits (70), Expect = 0.37
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = -1
Query: 432 TAHIGRSCQKDFRCG--PPSTCSGDDSDPDAEANRFCSVANQTIQREP-DFHHSSSNTCP 262
+AH R+ QK CG P + D + A CS+ +T+QRE D H CP
Sbjct: 34 SAHCARNLQKCEHCGYMVPKKLMDEHYDEN-HAPMICSLCQKTVQRELWDLHKGLQ--CP 90
Query: 261 STRPICSCCKRNVGSHSICYHICLLQL 181
C C + + I H ++ L
Sbjct: 91 QRMLACQYCDFELPAADIYEHQNIVSL 117
>11_06_0231 + 21531169-21531674,21533607-21533681,21535426-21535741
Length = 298
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/56 (35%), Positives = 25/56 (44%)
Frame = -1
Query: 474 VSAPRLPLWVGSYCTAHIGRSCQKDFRCGPPSTCSGDDSDPDAEANRFCSVANQTI 307
+ PRLP+W+ S C H+ SC D + ST D D A C V Q I
Sbjct: 114 ICLPRLPVWMNSICIPHL--SCM-DLKV---STIEASDLDVIARLPALCEVVLQFI 163
>04_04_1290 +
32399905-32399972,32400502-32400571,32400950-32401734,
32403068-32403674
Length = 509
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 456 PLWVGSYCTAHIGRSCQKDFRCGPPSTCSGDDSDPDAEAN-RFCSVANQTI 307
P+ G Y RS + DF GPP GDD D +A N R S A ++
Sbjct: 390 PIAAGRYAPE---RSGELDFGAGPPEEEDGDDDDDEARNNVRSSSSATMSV 437
>01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296
Length = 416
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 361 VVPTTSGWRTTPKIFLARPPNMCRTVRPDPKWKPGSRNAKT 483
V PT +G +P + + PP+ RT+ PDP W G + + T
Sbjct: 268 VQPTWTG-SNSPCVVNSTPPSPGRTMLPDPAWLAGIQISST 307
>11_03_0066 +
9529969-9530166,9530271-9530450,9530559-9531287,
9531554-9531706,9531803-9532238,9532322-9532501,
9532643-9532889,9533090-9533123,9533385-9533489,
9533833-9533967,9534220-9534399,9534504-9534626
Length = 899
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 451 KWKPGSRNAKTVFKNKFTLKFIL*NTFFCKCQLSNTDMSVSFFLNVAII 597
KWK G R+ TV+ L + CK +SNT+ S F N ++I
Sbjct: 352 KWKSGKRS--TVYGCTALLVVYYLDNLLCKAMISNTNTPRSQFFNSSLI 398
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -1
Query: 384 PSTCSGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRPICSCCKRNVGSHSIC 205
PS C+G D + D N+ CS A + P H + + I C N ++ C
Sbjct: 469 PSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNIGRLVEPKAIVFECGANCSCNNNC 528
>05_01_0564 -
4919294-4919391,4919491-4919620,4919700-4919789,
4919882-4919987,4920087-4920187,4920347-4920442,
4920549-4920648,4920761-4920897,4920980-4921111,
4921222-4921320,4921397-4921594,4921715-4921892,
4922020-4922075,4922168-4922320,4922422-4922514,
4922605-4922706,4922817-4922878,4922995-4923090,
4923354-4923453,4923546-4923617,4923728-4923775,
4923853-4923996
Length = 796
Score = 29.1 bits (62), Expect = 3.4
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +3
Query: 186 GEDKYGNKYYENPRFFYSRNRWVEYSDKYYLNYDGSQVPAEWFGWLHYKTDLPPHQDPSR 365
G+D + YY+ P +SR ++E SD S+ +++G KT L + P +
Sbjct: 614 GDD--ASAYYKVP---FSRTVYIEQSD---FRVKDSK---DYYGLAPGKTVLLRYAFPIK 662
Query: 366 PHYKWMADHTENLSGTTAQYVPYSTTRPK-VEAWEPKRKDSV*K*IHAKIYLVEHLFL 536
D+++N+ A+Y P T+PK V W + V + +I L E LFL
Sbjct: 663 CTEVIYGDNSDNIIEIRAEYDPSKATKPKGVLHWVAEPSPGV-NPLKVEIRLFEKLFL 719
>11_06_0233 +
21565233-21566053,21566840-21567890,21568075-21568758,
21568927-21569019,21571815-21571835
Length = 889
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 474 VSAPRLPLWVGSYCTAHI 421
V PRLP WV S C H+
Sbjct: 698 VDLPRLPAWVNSMCVPHL 715
>08_02_1185 +
25016146-25016422,25017201-25017443,25017551-25017672,
25017760-25017800,25017904-25018002,25018476-25018692
Length = 332
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = +3
Query: 309 WFGW-------LHYKTDLPPHQDPSRPHYKWMADHTENLSGTTA 419
WFGW L+ K D+P + S +KW H + + GTT+
Sbjct: 87 WFGWFAGKEGSLNMKLDMPSRDNFSSMSWKWRGLH-QKIGGTTS 129
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -1
Query: 480 LCVSAPRLPLWVGSYCTAHIGRSCQKDFRCGPPSTCSGDDSDPDAEANRFCSVANQTIQ 304
L S P P GS C H + +RCG TC + +D +NR C + I+
Sbjct: 760 LMPSQPDTPAKRGSCCICHQTQVDSLLYRCGHMCTCF-NCADQLKSSNRSCPICQSPIE 817
>02_05_0825 - 32042128-32042238,32042905-32043246,32043548-32043727
Length = 210
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -1
Query: 255 RPICSCCKRNVGSHSICYHICLLQLEHRPLHRPACIVYT-------TRRLYHRADELR 103
R C VG H + + +++HRP HR +V RL HRA+ELR
Sbjct: 76 RAACGEMLEAVGRHGRAQVVGVYEVQHRPEHRRLDVVDARWRGGGGAPRLRHRAEELR 133
>01_01_0323 + 2598850-2598924,2599756-2600844,2601352-2602589,
2602637-2602810,2603032-2603098,2603735-2603757,
2603899-2604001,2604087-2604848,2605098-2605292,
2605496-2606115,2606429-2606480,2606558-2607197,
2608366-2608574,2608660-2609189,2609500-2609566,
2609651-2609728,2610415-2610483,2610569-2610643
Length = 2021
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 300 EPDFHHSSSNTCPSTRPICSCCKRNVGSHSICYHICL 190
EPD S+ + P+CS C+ + +CY I L
Sbjct: 1205 EPDVSCSTGVVSEESLPVCSLCRDSDSKSPLCYLILL 1241
>08_01_0768 +
7408004-7408159,7409101-7409297,7427823-7428206,
7428456-7428837
Length = 372
Score = 28.3 bits (60), Expect = 6.0
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = -1
Query: 372 SGDDSDPDAEANRFCSVANQTIQREPDFHHSSSNTCPSTRPI-CSCCKRNVG---SHSIC 205
S DD+D + + N A RE + + + S P+T P+ + + NV S+C
Sbjct: 218 SADDNDDNDDDNDDNDDATLDSFRERELNLNPSTLSPTTAPVEANLGRSNVARDVHESLC 277
Query: 204 YHICLLQLEH-RPLHR-PAC-IVYTTRRLYHRADELR*KNCLACTRAKNXPRDIFVEITA 34
+ ++ + +P R PA R+ HR + C AK RD V TA
Sbjct: 278 VPVSAAKVHNQKPAPRDPASRFCRNCRKPGHRFSD-----CPLPRAAKAVRRDSQVTSTA 332
Query: 33 ADL*RTLNVQ 4
D R LNVQ
Sbjct: 333 HDTNRHLNVQ 342
>07_01_1203 -
11464142-11464324,11464422-11464484,11464685-11466515,
11467240-11468036
Length = 957
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 474 VSAPRLPLWVGSYCTAHI 421
V+ PRLP WV S C H+
Sbjct: 749 VTLPRLPSWVNSTCVPHL 766
>03_02_0772 - 11051657-11052919
Length = 420
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = -2
Query: 587 TFKKKLTDISVFDS*HLQKKVFYKINFSVNLFLNTVFAFRLPGFHFGSGRTVRHILGGRA 408
TFK+K T VFD + V + F V+ + A L F G GR R + GG
Sbjct: 292 TFKRKATPRDVFDM-SFRYGVLHMPAFVVDEGAKVLLA-NLVAFEQGGGRAARKLEGGNL 349
Query: 407 RKIFGVVRHPLVVGTTRILMRRQIGFV 327
F + LV + + R+ G +
Sbjct: 350 ATGFVALLGSLVNSRRDVEVLRRCGIL 376
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 117 HGGISASLYKLYRQDDV 167
HGGI A LY+LYR+ V
Sbjct: 529 HGGIGAELYRLYRKAPV 545
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 276 LNYDGSQVPAEWFGWLHYKTDLP-PH 350
LNYDG Q EW +HY +L PH
Sbjct: 155 LNYDGLQGHDEWVAEIHYLRNLKHPH 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,853,805
Number of Sequences: 37544
Number of extensions: 446883
Number of successful extensions: 1215
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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