BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F21
(594 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 27 0.46
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 25 1.4
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 25 1.4
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 1.4
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 25 1.8
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 2.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 23 5.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 7.4
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 7.4
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 9.8
AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding pr... 23 9.8
AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative odorant-b... 23 9.8
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 9.8
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 27.1 bits (57), Expect = 0.46
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
GAPG G G GR+G+T + P
Sbjct: 712 GAPGAPGKDGLPGRHGQTVKGEP 734
Score = 23.8 bits (49), Expect = 4.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 94 GAPGESGACGSAGRNG 141
G PG GA G AGR+G
Sbjct: 166 GVPGVPGAPGLAGRDG 181
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARP 156
G PGE+G G+ G G+ P
Sbjct: 703 GRPGEAGIDGAPGAPGKDGLP 723
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 25.4 bits (53), Expect = 1.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 318 LAVSSVVGAWSWGPXSASPQVSGECGEVAS 229
+A +VG SWG A P G G VAS
Sbjct: 237 VADGKLVGVVSWGYGCAQPGYPGVYGRVAS 266
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 25.4 bits (53), Expect = 1.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 318 LAVSSVVGAWSWGPXSASPQVSGECGEVAS 229
+A +VG SWG A P G G VAS
Sbjct: 237 VADGKLVGVVSWGYGCAQPGYPGVYGRVAS 266
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 1.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARP 156
G PGE GA G+NG P
Sbjct: 302 GPPGEPGAASEKGQNGEPGVP 322
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 25.0 bits (52), Expect = 1.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 325 QLKRYKETAQSTEAPAPAEPG 387
Q KRY +T +ST AP+ PG
Sbjct: 358 QTKRYSQTVESTNAPS-RSPG 377
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 2.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 22 CAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNG 141
C+K + T+ PP+ SL S + + CG G G
Sbjct: 779 CSKPSVTSTTPPTPASLSSSSSSSSSASSTSLCGGNGGGG 818
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/63 (17%), Positives = 31/63 (49%)
Frame = +3
Query: 378 RARDKLRKQVHVKLDNTMKVVEEQRIXVMEGSWSPVSVIREIVESGVQEDPFYVMDLGEV 557
RAR++ ++Q+HV + + E+ + + + + ++ E Q+ + ++ +
Sbjct: 212 RAREEFQQQIHVCMARKAWLEYEELFLLYSATLKDLKLAKKCTEEKEQQYNQFKQEMEAI 271
Query: 558 VAR 566
+AR
Sbjct: 272 LAR 274
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 251 PDTCGLALXGPQDQAPT 301
PDTCG L P + PT
Sbjct: 1058 PDTCGRVLIDPTLRKPT 1074
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 7.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 251 PDTCGLALXGPQDQAPT 301
PDTCG L P + PT
Sbjct: 1058 PDTCGRVLIDPTLRKPT 1074
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 11 MSFFVPSATKLPRFRRQLKAYPVGGLFWEHRVSPARVAVPGGTDAQ 148
+++ PSAT L + +A V GLF V + G TD++
Sbjct: 981 LAYNSPSATFLGGLTQPKQAKSVIGLFRRESSGSGGVVIGGVTDSE 1026
>AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP26 protein.
Length = 131
Score = 22.6 bits (46), Expect = 9.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 13 EFFCAKCN*TTKIPPSTESLPSGWLILGA 99
E + A+C TT +PP T + G GA
Sbjct: 28 EGYAAECVKTTGVPPETAAKLKGGDFAGA 56
>AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative
odorant-binding protein OBPjj13 protein.
Length = 131
Score = 22.6 bits (46), Expect = 9.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 13 EFFCAKCN*TTKIPPSTESLPSGWLILGA 99
E + A+C TT +PP T + G GA
Sbjct: 28 EGYAAECVKTTGVPPETAAKLKGGDFAGA 56
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 22.6 bits (46), Expect = 9.8
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = -2
Query: 140 PFRPALPHAPDSPGAPKISHPLG 72
PF P P P P + P+G
Sbjct: 794 PFTPPTDRTPTPPPLPATAEPMG 816
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,760
Number of Sequences: 2352
Number of extensions: 13021
Number of successful extensions: 72
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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