Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F21
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase p... 33 0.76
X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase (... 33 0.76
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 33 0.76
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 33 0.76
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 33 0.76
M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase p... 33 0.76
M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase p... 33 0.76
M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine... 33 0.76
M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein. 33 0.76
M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase p... 33 0.76
J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein. 33 0.76
DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2 ... 33 0.76
BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-... 33 0.76
BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-... 33 0.76
BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase... 33 0.76
AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase... 33 0.76
AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-... 33 0.76
AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-... 33 0.76
AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein. 33 0.76
AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein. 33 0.76
DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger pr... 32 1.3
AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger ... 32 1.3
BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein. 32 1.8
BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein. 32 1.8
AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens ... 32 1.8
M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collage... 31 2.3
L12347-1|AAA36358.1| 718|Homo sapiens collagen protein. 31 2.3
D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain pr... 31 2.3
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 31 2.3
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 31 2.3
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 31 2.3
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 31 2.3
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 31 2.3
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 31 2.3
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 31 2.3
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 31 2.3
U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM... 31 3.1
J00221-1|AAB59396.1| 339|Homo sapiens immunoglobulin alpha-2 he... 31 4.1
BX640854-1|CAE45921.1| 479|Homo sapiens hypothetical protein pr... 31 4.1
BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein pr... 31 4.1
BX538066-1|CAD97996.1| 478|Homo sapiens hypothetical protein pr... 31 4.1
BC073765-1|AAH73765.1| 477|Homo sapiens IGHA2 protein protein. 31 4.1
BC066594-1|AAH66594.1| 478|Homo sapiens Unknown (protein for MG... 31 4.1
BC065733-1|AAH65733.1| 480|Homo sapiens Unknown (protein for MG... 31 4.1
AY647979-1|AAT74071.1| 340|Homo sapiens immunoglobulin alpha 2m... 31 4.1
AL389978-1|CAB97534.1| 416|Homo sapiens Immunoglobulin heavy ... 31 4.1
AK126352-1|BAC86532.1| 490|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK125079-1|BAC86044.1| 477|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK123975-1|BAC85740.1| 487|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK098372-1|BAC05294.1| 243|Homo sapiens protein ( Homo sapiens ... 31 4.1
S71043-1|AAB30803.1| 340|Homo sapiens immunoglobulin A heavy ch... 30 5.4
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 30 5.4
BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein. 30 5.4
BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein. 30 5.4
BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein. 30 5.4
BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing tran... 30 5.4
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 30 5.4
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 30 5.4
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 30 5.4
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 30 5.4
AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein. 30 5.4
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 30 5.4
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 30 5.4
AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing tran... 30 5.4
AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens ... 30 5.4
AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens ... 30 5.4
AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein. 30 5.4
AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing prot... 30 5.4
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 30 7.1
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 30 7.1
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 30 7.1
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 7.1
L06862-1|AAA89196.1| 550|Homo sapiens type VII collagen protein. 30 7.1
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 7.1
J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human cartilage... 30 7.1
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 30 7.1
CR542266-1|CAG47062.1| 118|Homo sapiens NDUFA7 protein. 30 7.1
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 30 7.1
BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2... 30 7.1
BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2... 30 7.1
BC107892-1|AAI07893.1| 121|Homo sapiens NDUFA7 protein protein. 30 7.1
BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein. 30 7.1
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 30 7.1
BC003102-1|AAH03102.1| 113|Homo sapiens NADH dehydrogenase (ubi... 30 7.1
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 30 7.1
AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein p... 30 7.1
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 30 7.1
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 30 7.1
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 30 7.1
AF050637-1|AAD05427.1| 113|Homo sapiens NADH-ubiquinone oxidore... 30 7.1
AC007785-1|AAD38244.1| 477|Homo sapiens BC282485_1 protein. 30 7.1
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 30 7.1
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 29 9.4
Y15919-1|CAA75879.1| 122|Homo sapiens COL1A1 and PDGFB fusion t... 29 9.4
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 29 9.4
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 29 9.4
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 29 9.4
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 29 9.4
U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein. 29 9.4
L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen ... 29 9.4
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 29 9.4
D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein. 29 9.4
D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein. 29 9.4
CR456915-1|CAG33196.1| 118|Homo sapiens NDUFA7 protein. 29 9.4
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 29 9.4
BC053688-1|AAH53688.1| 890|Homo sapiens Rho GTPase activating p... 29 9.4
BC043387-1|AAH43387.1| 601|Homo sapiens ARHGAP30 protein protein. 29 9.4
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 29 9.4
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 29 9.4
AL591806-12|CAI15375.1| 924|Homo sapiens Rho GTPase activating ... 29 9.4
AL591806-11|CAI15374.1| 890|Homo sapiens Rho GTPase activating ... 29 9.4
AL591806-10|CAI15373.1| 577|Homo sapiens Rho GTPase activating ... 29 9.4
AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha ... 29 9.4
AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha ... 29 9.4
AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha ... 29 9.4
AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha ... 29 9.4
AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha ... 29 9.4
AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha ... 29 9.4
AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha... 29 9.4
AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha... 29 9.4
AK160366-1|BAD18709.1| 1110|Homo sapiens FLJ00267 protein protein. 29 9.4
AK126116-1|BAC86447.1| 499|Homo sapiens protein ( Homo sapiens ... 29 9.4
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 29 9.4
AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein. 29 9.4
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 29 9.4
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 29 9.4
>X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase
(ODC) protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 33.1 bits (72), Expect = 0.76
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G GR RP P
Sbjct: 908 GSPGERGAAGSGGPIGRQGRPGP 930
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 33.1 bits (72), Expect = 0.76
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G GR RP P
Sbjct: 929 GSPGERGAAGSGGPIGRQGRPGP 951
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 33.1 bits (72), Expect = 0.76
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G GR RP P
Sbjct: 1015 GSPGERGAAGSGGPIGRQGRPGP 1037
>M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine
decarboxylase gene, complete cds. ).
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>J04974-1|AAA52034.1| 961|Homo sapiens COL11A2 protein.
Length = 961
Score = 33.1 bits (72), Expect = 0.76
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G GR RP P
Sbjct: 286 GSPGERGAAGSGGPIGRQGRPGP 308
>DQ139275-1|ABA43896.1| 1313|Homo sapiens Tax1-binding protein 2
protein.
Length = 1313
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 754 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 812
>BX284668-3|CAH70057.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 1390
>BX284668-2|CAH70055.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 1509
>BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>AL049569-4|CAI20365.1| 1898|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 1898
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 1332 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 1390
>AL049569-3|CAI20363.1| 2017|Homo sapiens ciliary rootlet coiled-coil,
rootletin protein.
Length = 2017
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 1451 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 1509
>AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.76
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 504 VESGVQEDPFYVMDLGEVVARYXQWKELLP 593
V S +D FYV DLG+++ ++ +W + LP
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALP 60
>AB007914-1|BAA32290.2| 1919|Homo sapiens KIAA0445 protein protein.
Length = 1919
Score = 33.1 bits (72), Expect = 0.76
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 107 SPARVAVPGGTDAQXXXXXXXXXXDEPST*T-RPGCAVPGPADATSPHSPDTCGLALXG 280
SPA VPG + PST PG P P ATSP SPD A+ G
Sbjct: 1353 SPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRG 1411
>DQ079590-1|AAZ30918.1| 858|Homo sapiens ZXD-like zinc finger
protein protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -1
Query: 345 FLVTFQLS-GLAVSSVVGAWSWGPXS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 181
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 180 XXXXXXXXXXGCASVPPGTAT 118
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>AY936556-1|AAX23974.1| 858|Homo sapiens ZXD family zinc finger C
protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -1
Query: 345 FLVTFQLS-GLAVSSVVGAWSWGPXS----ASPQVSGECGEVASAGPGTAQPGRVYVEXX 181
FLV ++ G A + G+ P S AS G G A+ GPG A G V +
Sbjct: 75 FLVLLEVPHGGAAAEAAGSQEAEPGSRVNLASRPEQGPSGPAAAPGPGVAPAGAVTISSQ 134
Query: 180 XXXXXXXXXXGCASVPPGTAT 118
S PPG AT
Sbjct: 135 DLLVRLDRGVLALSAPPGPAT 155
>BC104943-1|AAI04944.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 60 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 90
>BC104941-1|AAI04942.1| 278|Homo sapiens FLJ39639 protein protein.
Length = 278
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 60 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 90
>AK096958-1|BAC04912.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ39639 fis, clone SMINT2003340. ).
Length = 252
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
P W++LG G S + G+ GRN R RPR SP+
Sbjct: 34 PIKWVVLGIRG-SNSAGNRGRN-RQLRPRTSPK 64
>M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collagen
protein.
Length = 599
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 358 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 397
>L12347-1|AAA36358.1| 718|Homo sapiens collagen protein.
Length = 718
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 278 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 317
>D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain
precursor protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 383 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 422
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 31.5 bits (68), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP-RPSP 168
PP +LP I G G G G GR G+T P +P P
Sbjct: 384 PPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGP 423
>U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM-1
protein.
Length = 382
Score = 31.1 bits (67), Expect = 3.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 218 PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P P D TSP SPDT + P +P DT +P+
Sbjct: 230 PEPPDTTSPESPDT--TSPESPDTTSPEPPDTTSPE 263
>J00221-1|AAB59396.1| 339|Homo sapiens immunoglobulin alpha-2 heavy
chain protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 100 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 151
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 152 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 181
>BX640854-1|CAE45921.1| 479|Homo sapiens hypothetical protein
protein.
Length = 479
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 240 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 291
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 292 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 321
>BX538077-1|CAD98001.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 253 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 304
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 305 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 334
>BX538066-1|CAD97996.1| 478|Homo sapiens hypothetical protein
protein.
Length = 478
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 239 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 290
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 291 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 320
>BC073765-1|AAH73765.1| 477|Homo sapiens IGHA2 protein protein.
Length = 477
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 238 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 289
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 290 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 319
>BC066594-1|AAH66594.1| 478|Homo sapiens Unknown (protein for
MGC:70893) protein.
Length = 478
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 239 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 290
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 291 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 320
>BC065733-1|AAH65733.1| 480|Homo sapiens Unknown (protein for
MGC:72071) protein.
Length = 480
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 241 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 292
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 293 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 322
>AY647979-1|AAT74071.1| 340|Homo sapiens immunoglobulin alpha 2m(1)
heavy chain constant region protein.
Length = 340
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 101 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 152
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 153 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 182
>AL389978-1|CAB97534.1| 416|Homo sapiens Immunoglobulin heavy
chain variant protein.
Length = 416
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 177 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 228
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 229 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 258
>AK126352-1|BAC86532.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ44381 fis, clone TRACH3035526, highly similar
to Ig alpha-2 chain C region. ).
Length = 490
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 251 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 302
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 303 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 332
>AK125079-1|BAC86044.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ43089 fis, clone COLON2000568, highly similar
to Ig alpha-2 chain C region. ).
Length = 477
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 238 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 289
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 290 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 319
>AK123975-1|BAC85740.1| 487|Homo sapiens protein ( Homo sapiens
cDNA FLJ41981 fis, clone SMINT2011888, highly similar
to Protein Tro alpha1 H,myeloma. ).
Length = 487
Score = 30.7 bits (66), Expect = 4.1
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 248 CPVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 299
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 300 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 329
>AK098372-1|BAC05294.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ25506 fis, clone CBR05185. ).
Length = 243
Score = 30.7 bits (66), Expect = 4.1
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +1
Query: 82 WLILGAPGESGACGSAGRNGRT-ARPRP--SPRCWRRALNVDPP 204
W+ G G G G G R ARP P RCWR PP
Sbjct: 2 WICPGGGGGGGGGGGGGGGDREDARPAPLCCGRCWRSGCAARPP 45
>S71043-1|AAB30803.1| 340|Homo sapiens immunoglobulin A heavy chain
allotype 2 protein.
Length = 340
Score = 30.3 bits (65), Expect = 5.4
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -1
Query: 453 CVVPPQPSWCYPTLRGLVSLVYPXXXXXXXXXXLCRFLVTFQLSGLAVSSVVGAWSWGPX 274
C VPP P C+P L SL P +T L+GL +S ++W P
Sbjct: 101 CRVPPPPPCCHPRL----SLHRPALEDLLLGSEA---NLTCTLTGLRDAS-GATFTWTPS 152
Query: 273 SASPQVSGE-------CGEVASAGPGTAQP 205
S V G C V+S PG AQP
Sbjct: 153 SGKSAVQGPPERDLCGCYSVSSVLPGCAQP 182
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 901 GSPGERGAAGSGGPIGPPGRPGP 923
>BC128464-1|AAI28465.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC128463-1|AAI28464.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>BC022556-1|AAH22556.2| 220|Homo sapiens MYCT1 protein protein.
Length = 220
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 65 LVLGGFIWAVFICLSRRRRASAPIS 89
>BC003533-1|AAH03533.1| 420|Homo sapiens kringle containing
transmembrane protein 2 protein.
Length = 420
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 64 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 168
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AL390960-1|CAI23573.1| 235|Homo sapiens myc target 1 protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 1015 GSPGERGAAGSGGPIGPPGRPGP 1037
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
G+PGE GA GS G G RP P
Sbjct: 929 GSPGERGAAGSGGPIGPPGRPGP 951
>AK223422-1|BAD97142.1| 420|Homo sapiens kringle-containing
transmembrane protein 2 isoform b precursor variant
protein.
Length = 420
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 64 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 168
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AK075033-1|BAC11365.1| 381|Homo sapiens protein ( Homo sapiens
cDNA FLJ90552 fis, clone OVARC1000811, highly similar to
Kringle-containing transmembrane protein 2 isoform b
precursor. ).
Length = 381
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 64 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 168
E P W + GAPGE+G CG+ N P P+P
Sbjct: 335 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 366
>AK027669-1|BAB55281.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ14763 fis, clone NT2RP3003621. ).
Length = 420
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 64 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 168
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>AK024922-1|BAB15035.1| 235|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21269 fis, clone COL01745. ).
Length = 235
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AF527367-1|AAM88866.1| 235|Homo sapiens MTLC protein.
Length = 235
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 430 MVLSNFTWTCFLSLSRARRGPAPRS 356
+VL F W F+ LSR RR AP S
Sbjct: 80 LVLGGFIWAVFICLSRRRRASAPIS 104
>AB086356-1|BAC00824.1| 420|Homo sapiens kringle-containing protein
protein.
Length = 420
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 64 ESLPSGWLILGAPGESGACGSAGRNGRTARPRPSP 168
E P W + GAPGE+G CG+ N P P+P
Sbjct: 374 EKGPRRWGLPGAPGEAGLCGT---NSPEGWPCPAP 405
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP T P + G PGE G G G G PR
Sbjct: 648 PPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVGTQGPR 687
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 324 SGLAVSSVVGAWSWGPXSASPQVSGECGEVASAGPGTAQPG 202
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 253 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 291
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 324 SGLAVSSVVGAWSWGPXSASPQVSGECGEVASAGPGTAQPG 202
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 2030 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 2068
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVD 198
P G ++GAPG GA G G GR P AL D
Sbjct: 2715 PPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTED 2756
>L06862-1|AAA89196.1| 550|Homo sapiens type VII collagen protein.
Length = 550
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVD 198
P G ++GAPG GA G G GR P AL D
Sbjct: 353 PPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTED 394
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 73 PSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVD 198
P G ++GAPG GA G G GR P AL D
Sbjct: 2747 PPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTED 2788
>J05062-1|AAA35726.1| 480|Homo sapiens protein ( Human
cartilage-specific proteoglycan core protein (CSPCP)
mRNA, 3' end. ).
Length = 480
Score = 29.9 bits (64), Expect = 7.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 324 SGLAVSSVVGAWSWGPXSASPQVSGECGEVASAGPGTAQPG 202
SGL VS + G SA+P+VSGE ++ GT PG
Sbjct: 95 SGLGVSGSTLTFQEGEASAAPEVSGE--STTTSDVGTEAPG 133
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 1056 VGSPGERGSAGTAGPIGLRGRPGP 1079
>CR542266-1|CAG47062.1| 118|Homo sapiens NDUFA7 protein.
Length = 118
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 7 ADEFFCAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRA 186
++ ++C + +PPS L+ G P ES A + + T P+P R
Sbjct: 55 SNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVT----PAPPIKRWE 110
Query: 187 LNVDPPWL 210
L+ D P+L
Sbjct: 111 LSSDQPYL 118
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 940 VGSPGERGSAGTAGPIGLPGRPGP 963
>BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRPSPRCWRRAL-NVDPP 204
G PGE G G G G P PSP + AL ++ PP
Sbjct: 242 GLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPP 279
>BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRPSPRCWRRAL-NVDPP 204
G PGE G G G G P PSP + AL ++ PP
Sbjct: 242 GLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPP 279
>BC107892-1|AAI07893.1| 121|Homo sapiens NDUFA7 protein protein.
Length = 121
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 7 ADEFFCAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRA 186
++ ++C + +PPS L+ G P ES A + + T P+P R
Sbjct: 58 SNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVT----PAPPIKRWE 113
Query: 187 LNVDPPWL 210
L+ D P+L
Sbjct: 114 LSSDQPYL 121
>BC083495-1|AAH83495.1| 388|Homo sapiens COL14A1 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP T P + G PGE G G G G PR
Sbjct: 265 PPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVGTQGPR 304
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP T P + G PGE G G G G PR
Sbjct: 636 PPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVGTQGPR 675
>BC003102-1|AAH03102.1| 113|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 7, 14.5kDa protein.
Length = 113
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 7 ADEFFCAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRA 186
++ ++C + +PPS L+ G P ES A + + T P+P R
Sbjct: 50 SNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVT----PAPPIKRWE 105
Query: 187 LNVDPPWL 210
L+ D P+L
Sbjct: 106 LSSDQPYL 113
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 1056 VGSPGERGSAGTAGPIGLPGRPGP 1079
>AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein
protein.
Length = 441
Score = 29.9 bits (64), Expect = 7.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRPSPRCWRRAL-NVDPP 204
G PGE G G G G P PSP + AL ++ PP
Sbjct: 244 GLPGEMGRPGPPGPPGPAGNPGPSPNSPQGALYSLQPP 281
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 1017 VGSPGERGSAGTAGPIGLPGRPGP 1040
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 1068 VGSPGERGSAGTAGPIGLPGRPGP 1091
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 1056 VGSPGERGSAGTAGPIGLPGRPGP 1079
>AF050637-1|AAD05427.1| 113|Homo sapiens NADH-ubiquinone
oxidoreductase B14.5A subunit protein.
Length = 113
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 7 ADEFFCAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRA 186
++ ++C + +PPS L+ G P ES A + + T P+P R
Sbjct: 50 SNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVT----PAPPIKRWE 105
Query: 187 LNVDPPWL 210
L+ D P+L
Sbjct: 106 LSSDQPYL 113
>AC007785-1|AAD38244.1| 477|Homo sapiens BC282485_1 protein.
Length = 477
Score = 29.9 bits (64), Expect = 7.1
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = +1
Query: 112 GACGSAGRNGRTARPRPSPRCWRRALNVDP 201
G GS GR GR ARP PSP RAL DP
Sbjct: 285 GGRGSRGR-GRPARPSPSP-TGGRALRFDP 312
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRP 162
+G+PGE G+ G+AG G RP P
Sbjct: 267 VGSPGERGSAGTAGPIGLPGRPGP 290
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 902 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 938
>Y15919-1|CAA75879.1| 122|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 122
Score = 29.5 bits (63), Expect = 9.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 91 LGAPGESGACGSAGRNGRTARPRPSPRCWRRALNVDP 201
+GAPG GA GSAG G T P + R + DP
Sbjct: 69 VGAPGAKGARGSAGPPGATGFPGATDRVGPPGPSGDP 105
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
GAPGE G G GR G P P
Sbjct: 2258 GAPGERGRTGPLGRKGEPGEPGP 2280
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 280 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 316
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDQGSGG 521
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDQGSGG 522
>U04845-1|AAA19569.2| 1691|Homo sapiens A type IV collagen protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>L22763-1|AAA16338.1| 542|Homo sapiens alpha-6 type IV collagen
protein.
Length = 542
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 902 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 938
>D63562-1|BAA09791.1| 1600|Homo sapiens a6(IV) collagen protein.
Length = 1600
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 488 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 517
>D21337-1|BAA04809.1| 1678|Homo sapiens collagen protein.
Length = 1678
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 521
>CR456915-1|CAG33196.1| 118|Homo sapiens NDUFA7 protein.
Length = 118
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 7 ADEFFCAKCN*TTKIPPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPRCWRRA 186
++ ++C + +PPS L+ G P ES A + + T P+P R
Sbjct: 55 SNNYYCTRDGRRESVPPSIIMSSQKALVSGKPAESSAVAATEKKAVT----PAPPIKRWE 110
Query: 187 LNVDPPWL 210
L+ D P+L
Sbjct: 111 LSWDQPYL 118
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 902 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 938
>BC053688-1|AAH53688.1| 890|Homo sapiens Rho GTPase activating
protein 30 protein.
Length = 890
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 458 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 505
>BC043387-1|AAH43387.1| 601|Homo sapiens ARHGAP30 protein protein.
Length = 601
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 310 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 357
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 902 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 938
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
GAPGE G G GR G P P
Sbjct: 60 GAPGERGRTGPLGRKGEPGEPGP 82
>AL591806-12|CAI15375.1| 924|Homo sapiens Rho GTPase activating
protein 30 protein.
Length = 924
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 281 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 328
>AL591806-11|CAI15374.1| 890|Homo sapiens Rho GTPase activating
protein 30 protein.
Length = 890
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 458 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 505
>AL591806-10|CAI15373.1| 577|Homo sapiens Rho GTPase activating
protein 30 protein.
Length = 577
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 458 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 505
>AL136080-2|CAI40758.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>AL136080-1|CAI40756.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 521
>AL109943-2|CAI42995.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>AL109943-1|CAI42993.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 521
>AL034369-3|CAI42047.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>AL034369-2|CAI42045.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 521
>AL031177-13|CAI43140.1| 1691|Homo sapiens collagen type IV alpha 6
protein.
Length = 1691
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 493 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 522
>AL031177-12|CAI43139.1| 1690|Homo sapiens collagen type IV alpha 6
protein.
Length = 1690
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNG 141
PP P W ++G PG GA G G G
Sbjct: 492 PPGEPGPPGPWGLIGLPGLKGARGDRGSGG 521
>AK160366-1|BAD18709.1| 1110|Homo sapiens FLJ00267 protein protein.
Length = 1110
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 467 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 514
>AK126116-1|BAC86447.1| 499|Homo sapiens protein ( Homo sapiens
cDNA FLJ44128 fis, clone THYMU2007060, weakly similar
to Mus musculus Cdc42 GTPase-activating protein mRNA. ).
Length = 499
Score = 29.5 bits (63), Expect = 9.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 185 PST*TRPGCAV-PGPADATSPHSPDTCGLALXGPQDQAPTTLDTANPD 325
P++ PG + PGP D SP + LA GP D AP D+ + +
Sbjct: 310 PASGPGPGPGLGPGPPDEKLEASPASSPLADSGPDDLAPALEDSLSQE 357
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 902 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 938
>AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein.
Length = 2588
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
GAPGE G G GR G P P
Sbjct: 2258 GAPGERGRTGPLGRKGEPGEPGP 2280
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 52 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARPRPSPR 171
PP P +G+PG +GA G AGR+G P R
Sbjct: 722 PPGARGPPGA---VGSPGVNGAPGEAGRDGNPGNDGPPGR 758
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 29.5 bits (63), Expect = 9.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 94 GAPGESGACGSAGRNGRTARPRP 162
GAPGE G G GR G P P
Sbjct: 783 GAPGERGRTGPLGRKGEPGEPGP 805
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,633,164
Number of Sequences: 237096
Number of extensions: 2351476
Number of successful extensions: 11979
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 7742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11811
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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