Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F16
(584 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 144 3e-35
04_01_0042 + 473912-474058,474208-474349,474442-476264 137 5e-33
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 135 3e-32
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 135 3e-32
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 134 4e-32
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 122 2e-28
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 120 6e-28
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 107 6e-24
06_03_1273 + 28892774-28893946,28894964-28895104,28895277-288953... 30 1.6
01_06_1797 + 39941482-39941608,39942302-39942497,39942601-399428... 29 2.1
11_01_0655 + 5294905-5296083 29 3.6
11_01_0652 - 5278178-5278388,5279118-5279197,5279198-5279271,527... 29 3.6
04_03_1003 - 21631188-21631274,21631939-21632043,21632171-216322... 29 3.6
05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317 28 4.8
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 28 4.8
02_05_1011 + 33487670-33487958,33490794-33492100,33492541-334928... 28 4.8
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 28 6.3
08_01_0422 + 3737429-3738006,3738083-3738824 28 6.3
11_04_0325 + 16395124-16396794 27 8.3
07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406... 27 8.3
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 144 bits (350), Expect = 3e-35
Identities = 79/147 (53%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Frame = +3
Query: 150 LGSSREGSRTDAEAVLREEEAISPDALSVAQMKELRDRAQNYTFQTEVNRMMKLIINSLY 329
+G G TD+E V RE E+IS K LR A+ + FQ EV+R+M +IINSLY
Sbjct: 74 IGGVPHGLSTDSEVVQREAESIS--------RKTLRSSAEKFEFQAEVSRLMDIIINSLY 125
Query: 330 RNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA--NPELSIRIKAEPDKRLLHIIDSGV 503
NK+IFLRELISN SDALDKIR ++LTD+ VL +L I+IK + +K++L I D G+
Sbjct: 126 SNKDIFLRELISNASDALDKIRFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGI 185
Query: 504 GMTRADLINNLGTIAKSGTADFLSXMQ 584
GMT+ DLI NLGTIAKSGT+ F+ MQ
Sbjct: 186 GMTKEDLIKNLGTIAKSGTSAFVEKMQ 212
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 137 bits (332), Expect = 5e-33
Identities = 64/106 (60%), Positives = 82/106 (77%)
Frame = +3
Query: 267 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 446
+ + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A PEL
Sbjct: 13 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELF 72
Query: 447 IRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXMQ 584
IR+ + L IIDSGVGMT++DL+NNLGTIA+SGT +F+ +Q
Sbjct: 73 IRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALQ 118
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 135 bits (326), Expect = 3e-32
Identities = 63/110 (57%), Positives = 81/110 (73%)
Frame = +3
Query: 252 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 431
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 432 NPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXM 581
PEL I I + L IIDSGVGMT++DL+NNLGTIA+SGT +F+ +
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEAL 110
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 135 bits (326), Expect = 3e-32
Identities = 63/110 (57%), Positives = 81/110 (73%)
Frame = +3
Query: 252 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 431
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 432 NPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXM 581
PEL I I + L IIDSGVGMT++DL+NNLGTIA+SGT +F+ +
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEAL 110
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 134 bits (325), Expect = 4e-32
Identities = 62/110 (56%), Positives = 81/110 (73%)
Frame = +3
Query: 252 LRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEA 431
+ + + FQ E+N+++ LIIN+ Y NKEIFLRELISN SDALDKIR SLTD+ L+A
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 432 NPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXM 581
PEL I I + L IIDSG+GMT++DL+NNLGTIA+SGT +F+ +
Sbjct: 61 QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEAL 110
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 122 bits (294), Expect = 2e-28
Identities = 62/141 (43%), Positives = 92/141 (65%), Gaps = 2/141 (1%)
Frame = +3
Query: 168 GSRTDAEAVLREEEAISPDALSVAQMKELRDR--AQNYTFQTEVNRMMKLIINSLYRNKE 341
G+ A LRE + S A + D + + +Q EVNR+M LI++SLY NKE
Sbjct: 318 GTDNAASLKLREGSLVGRRYESSAAAVDSSDTPPVEKHEYQAEVNRLMDLIVHSLYSNKE 377
Query: 342 IFLRELISNGSDALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLLHIIDSGVGMTRAD 521
+FLREL+SN SDALDK+R +S+TD +++ L IRI+ + + ++ I D+G+GMTR +
Sbjct: 378 VFLRELVSNASDALDKLRYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQE 437
Query: 522 LINNLGTIAKSGTADFLSXMQ 584
L+++LGTIA SGTA FL ++
Sbjct: 438 LVDSLGTIASSGTAKFLKALK 458
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 120 bits (290), Expect = 6e-28
Identities = 57/118 (48%), Positives = 84/118 (71%)
Frame = +3
Query: 231 SVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLT 410
+VA+ E + + +Q EV+R+M LI++SLY +KE+FLREL+SN SDALDK+R + +T
Sbjct: 330 AVAEKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKLRFLGVT 389
Query: 411 DRGVLEANPELSIRIKAEPDKRLLHIIDSGVGMTRADLINNLGTIAKSGTADFLSXMQ 584
D +L EL IRIK +PD + I D+G+GMT+ +L + LGTIA+SGT+ FL ++
Sbjct: 390 DSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFLKALK 447
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 107 bits (257), Expect = 6e-24
Identities = 54/115 (46%), Positives = 80/115 (69%), Gaps = 9/115 (7%)
Frame = +3
Query: 267 QNYTFQTEVNRMMKLIINSLYRNKEIFLRELISNGSDALDKIRLMSLTDRGVLEANPELS 446
+ + +Q EV+R++ LI++SLY +KE+FLREL+SN SDALDK+R +S+TD VL EL
Sbjct: 83 EQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKLRFLSVTDSSVLSDGGELE 142
Query: 447 IRIKAEPDKRLLHII---------DSGVGMTRADLINNLGTIAKSGTADFLSXMQ 584
IRIK +P+ + I D+G+GMT+ +L + LGTIA+SGT+ FL ++
Sbjct: 143 IRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTIAQSGTSKFLKALK 197
>06_03_1273 +
28892774-28893946,28894964-28895104,28895277-28895329,
28895852-28895966
Length = 493
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 521 VGARHADAGVDDVQQPLVGLGLDADAE 441
+G H DAG+ ++ P +GLGL+ + E
Sbjct: 336 LGFDHGDAGISALKDPKIGLGLNLNTE 362
>01_06_1797 +
39941482-39941608,39942302-39942497,39942601-39942828,
39943157-39943388,39943476-39943583,39943696-39943968,
39944261-39944545
Length = 482
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 231 SVAQMKELRDRAQNYTFQTEVNRMMKLIINSLYR--NKEIFLRELISNGSDALDKIRLMS 404
SV Q+K R R Q ++ + NSL+ +++ + ++L+ GS L ++
Sbjct: 383 SVPQVKGHRLRGGPQMIQLSLDGKRIYVTNSLFSRWDEQFYGQDLVKKGSHML---QIDV 439
Query: 405 LTDRGVLEANPELSIRIKAEPD 470
T++G L NP + AEP+
Sbjct: 440 DTEKGGLSINPNFFVDFGAEPE 461
>11_01_0655 + 5294905-5296083
Length = 392
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 405 LTDRGVLEANPELS-IRIKAEPDKRLLHIIDSGVGMTRADL 524
LT L+A+ +LS +R A+PD L + SGVG++RADL
Sbjct: 61 LTGAQALKASKKLSHLRSPAKPDAVLAVL--SGVGLSRADL 99
>11_01_0652 -
5278178-5278388,5279118-5279197,5279198-5279271,
5279721-5279787,5279972-5280034,5280288-5281442
Length = 549
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 405 LTDRGVLEANPELS-IRIKAEPDKRLLHIIDSGVGMTRADL 524
LT L+A+ +LS +R A+PD L + SGVG++RADL
Sbjct: 55 LTGAQALKASKKLSHLRSPAKPDAVLAVL--SGVGLSRADL 93
>04_03_1003 -
21631188-21631274,21631939-21632043,21632171-21632248,
21632337-21632411,21632908-21632994,21633091-21633158,
21633478-21633565,21633684-21633784,21633831-21633990,
21635088-21635246,21635351-21635527
Length = 394
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 535 RLLMRSARVMPTPESMMCSSRLSGSALMRMLSSGFASSTPRSVSDIRRIL 386
RLL + A+ + S+MC + S SA ++SG A+ + DIR +L
Sbjct: 55 RLLPQEAKAAGSGRSVMCMASASASAASAAVASG-AAELKAAREDIRELL 103
>05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317
Length = 507
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = -1
Query: 557 AGLGDGAEVVDEVGARHADAGVDDVQQPLVGLGLDADAELRVRFQHAAVRQRHQTDLVQR 378
A GD V + + +++ D+ +P GL L + + ++H L+
Sbjct: 322 ANSGDEETVSEARESNNSEMHNDEESKPPKPAGLKKS--LVEKNDELSEERKHLAALLSL 379
Query: 377 I*TVRDQLAEEDLFISVERVDDEL 306
+ + D L + DLF +V V+DEL
Sbjct: 380 LVVICDNLVDADLFSNVTSVNDEL 403
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 420 VLEANPELSIRIKAEPDKRLL-HIIDSGVGMTRA 518
V+EA+P LSI+ KA + LL H D+G +T A
Sbjct: 88 VIEADPVLSIQEKARRRQELLGHAGDAGAAITEA 121
>02_05_1011 +
33487670-33487958,33490794-33492100,33492541-33492853,
33493190-33494247
Length = 988
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 9 TSKSRWMFLTPAMKHIWLFGLGVLLLSGW 95
TS S W+FL P +WL L +G+
Sbjct: 572 TSTSMWIFLQPLTTSLWLASLAFFCFTGF 600
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 179 SAGSFSG*TQVGINCDLFHCA 117
+AG+ +G +VGI+C LFH A
Sbjct: 84 AAGTAAGGVEVGISCGLFHSA 104
>08_01_0422 + 3737429-3738006,3738083-3738824
Length = 439
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 426 EANPELSIRIKAEPDKRLLHIIDSGVGM 509
EA PEL +R+K E D R + D V +
Sbjct: 141 EAKPELHLRVKMEADPRYIFEFDDEVAL 168
>11_04_0325 + 16395124-16396794
Length = 556
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 548 GDGAEVVDEVGA-RHADAGVDDVQQPLVGLGLDADAELRVRFQHAAV 411
G A+V+DE+ A R A ++ G GLD D R+R HAA+
Sbjct: 337 GVEAQVLDEIAATRRARGAGEEGGDDGEGEGLDLDDYRRMRVLHAAL 383
>07_01_0004 +
35300-35533,35617-35732,39044-39287,39451-40578,
40657-40833
Length = 632
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = -2
Query: 565 SAVPDLAMVPRLLMRSARVMPTPESMMCSSRLSGSALMRMLSSGFASSTPRSVSDIRRIL 386
S P ++ LL ++P ES++ R + LMR+++S ++S P+ V+ + +L
Sbjct: 510 SCGPSMSATVTLLPSLKPLIPETESLV--ERSARETLMRLIASTPSASNPQLVNILPAVL 567
Query: 385 SNASE 371
++ E
Sbjct: 568 TDVPE 572
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,115,246
Number of Sequences: 37544
Number of extensions: 221148
Number of successful extensions: 909
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -