Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_F15
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   6.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 225 MIFTNN*KSFCNPILQLDKKCV 290
           +I TNN   +C  ++ L K CV
Sbjct: 238 IILTNNQAKYCTTLIGLIKNCV 259


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 480 FK*CIIIHLQYLSMNNYLACLHHLNVISCIF 572
           F  C ++ +Q    NNY +  H+L V   +F
Sbjct: 505 FDYCTVLRVQ--RFNNYQSLAHYLRVFFTVF 533


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 163 FIXFCYSFIVXSXWRXYVFIRSICI 89
           FI F   F++ + +  Y FI  +C+
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCV 113


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 134 NNEAITEXYELLESTLDELNSALDFLERKN 223
           NNEA     +   +  DE+     FLER+N
Sbjct: 145 NNEAAKRSRDARRAKEDEIAIRCAFLEREN 174


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 182 DELNSALDFLERKNDDIHQQLKELLQ 259
           +EL   +DF  R     H++L E+L+
Sbjct: 95  EELRRLMDFGVRSAPSTHEELLEVLK 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,457
Number of Sequences: 336
Number of extensions: 2631
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)