Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_F13
         (766 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         156   8e-40
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         156   8e-40
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         156   8e-40
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          152   1e-38
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   4.5  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.8  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  156 bits (378), Expect = 8e-40
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
 Frame = +3

Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
           A V   G+G    GFAG+  P+ + PS         VG    + +   +   D ++GDEA
Sbjct: 8   ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59

Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
               G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   NRE 
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
           +   I  + +AG ++T ++  +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  156 bits (378), Expect = 8e-40
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
 Frame = +3

Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
           A V   G+G    GFAG+  P+ + PS         VG    + +   +   D ++GDEA
Sbjct: 8   ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59

Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
               G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   NRE 
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
           +   I  + +AG ++T ++  +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  156 bits (378), Expect = 8e-40
 Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
 Frame = +3

Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
           A V   G+G    GFAG+  P+ + PS         VG    + +   +   D ++GDEA
Sbjct: 8   ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59

Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
               G  ++KYP+ HGIV +WD ME+      +  LR  PE+H  L+TE PLN   NRE 
Sbjct: 60  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
           + +IMFE+FN P +Y+A+QAVL+L AS ++        TGIV+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYA 171

Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
           +   I  + +AG ++T ++  +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  152 bits (368), Expect = 1e-38
 Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
 Frame = +3

Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
           A V   G+G    GFAG+  P+ + PS         VG    + +   + + D ++GDEA
Sbjct: 8   ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGNKDAYVGDEA 59

Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
               G  ++KYP+ HGI+ +WD ME+      +  LR  PE+H  L+TE PLN   NRE 
Sbjct: 60  QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREK 119

Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
           + +IMFE+F  P +Y+A+QAVL+L AS ++        TG+V+DSGDGV+H VP+ EGY 
Sbjct: 120 MTQIMFETFAAPAVYVAIQAVLSLYASGRT--------TGVVLDSGDGVSHTVPIYEGYA 171

Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
           +   I  + +AG ++T ++  +L ER
Sbjct: 172 LPHAILRMDLAGRDLTDYLMKILTER 197


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 17/82 (20%), Positives = 31/82 (37%)
 Frame = +3

Query: 255  TRRMTKAVEDLDFFIGDEAFEATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPED 434
            TR   + + D+  + G    E T +  +    HG   ++  +  + E    +     PE+
Sbjct: 958  TRWTHRIIRDISAWQGRRHGEMTFHLAQVLSGHGFFREYLAINGFTESPDCRSCAGVPEN 1017

Query: 435  HHFLMTEPPLNTPENREYLAEI 500
             H  + E P       EY  E+
Sbjct: 1018 AHHAIFECPRFARVRMEYFGEL 1039


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 4/25 (16%)
 Frame = +2

Query: 593 THLHWHRSRQRRWRY----SHCSSC 655
           T +HWH   QRR  Y     H S C
Sbjct: 376 TTIHWHGLHQRRTPYMDGVPHVSQC 400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,604
Number of Sequences: 2352
Number of extensions: 14005
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)