Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F13
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 328 3e-90
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 157 6e-39
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 157 8e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 157 8e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 157 8e-39
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 157 8e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 157 8e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 157 8e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 157 8e-39
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 155 3e-38
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 153 2e-37
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 147 7e-36
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 139 2e-33
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 124 9e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 101 4e-22
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 50 1e-06
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 50 1e-06
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 50 1e-06
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 48 1e-05
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 8.4
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 328 bits (805), Expect = 3e-90
Identities = 160/223 (71%), Positives = 178/223 (79%), Gaps = 7/223 (3%)
Frame = +3
Query: 114 MGXH-FPACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKX-TAKVGDQSTR---RMTKAV 278
M H PACV GTG LG+AGN EPQFIIPS IA+K A Q+ R R+ +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 279 EDLDFFIGDEAFE--ATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMT 452
+DLDFFIGDEA AT Y+VKYP+RHGIVEDWDLMERY EQC+FKYLRAEPEDH FL+T
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 453 EPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDG 632
EPPLNTPENREY AEIMFESFNVPGLYIAVQAVLAL ASW SR + ER+ TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 633 VTHIVPVAEGYVIGSCIKHIPIAGXNITSFIQSLLRERXVGIP 761
VTH +PVA+GYVIGSCIKHIPIAG +IT FIQSLLR+R IP
Sbjct: 181 VTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIP 223
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 157 bits (382), Expect = 6e-39
Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A + G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALILDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TGIV+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 157 bits (381), Expect = 8e-39
Identities = 83/206 (40%), Positives = 120/206 (58%), Gaps = 1/206 (0%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREY 488
G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 489 LAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYV 668
+ +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY
Sbjct: 120 MTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYA 171
Query: 669 IGSCIKHIPIAGXNITSFIQSLLRER 746
+ I + +AG ++T ++ +L ER
Sbjct: 172 LPHAILRLDLAGRDLTDYLMKILTER 197
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 155 bits (376), Expect = 3e-38
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 1/212 (0%)
Frame = +3
Query: 114 MGXHFPACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDF 293
M A V G+G GFAG+ P+ + PS VG + + + D
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDS 52
Query: 294 FIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNT 470
++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PLN
Sbjct: 53 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 112
Query: 471 PENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVP 650
NRE + +IMFE+FN P +Y+ +QAVL+L AS ++ TGIV+D+GDGVTH VP
Sbjct: 113 KSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRT--------TGIVLDTGDGVTHTVP 164
Query: 651 VAEGYVIGSCIKHIPIAGXNITSFIQSLLRER 746
+ EGY + I+ + +AG ++T ++ +L ER
Sbjct: 165 IYEGYALPHAIQRLDLAGRDLTDYMMKILTER 196
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 153 bits (370), Expect = 2e-37
Identities = 79/193 (40%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 171 GFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY-SVKYPV 347
GFAG+ P+ + PS VG + + + D ++GDEA G ++KYP+
Sbjct: 7 GFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 58
Query: 348 RHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPLNTPENREYLAEIMFESFNVPG 527
HGIV +WD ME+ + LR PE+H L+TE PLN NRE + +IMFE+FN P
Sbjct: 59 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 118
Query: 528 LYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGX 707
+Y+A+QAVL+L AS ++ TG+V+DSGDGVTH VP+ EGY + I + +AG
Sbjct: 119 MYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 170
Query: 708 NITSFIQSLLRER 746
++T ++ +L ER
Sbjct: 171 DLTDYLMKILTER 183
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 147 bits (357), Expect = 7e-36
Identities = 70/154 (45%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Frame = +3
Query: 288 DFFIGDEAFEATGY-SVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFLMTEPPL 464
D ++GDEA G ++KYP+ HGIV +WD ME+ + LR PE+H L+TE PL
Sbjct: 8 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 67
Query: 465 NTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHI 644
N NRE + +IMFE+FN P +Y+A+QAVL+L AS ++ TG+V+DSGDGVTH
Sbjct: 68 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGVVLDSGDGVTHT 119
Query: 645 VPVAEGYVIGSCIKHIPIAGXNITSFIQSLLRER 746
VP+ EGY + I + +AG ++T ++ +L ER
Sbjct: 120 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 153
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 139 bits (337), Expect = 2e-33
Identities = 79/199 (39%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Frame = +3
Query: 150 GTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEAFEATG- 326
G+G GFAG ++P+ ++ VG R+ D D FIG +A G
Sbjct: 16 GSGVIKAGFAGEQQPK--------VRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGL 67
Query: 327 YSVKYPVRHGIVEDWDLMERYIEQCVFK-YLRAEPEDHHFLMTEPPLNTPENREYLAEIM 503
+S++YP+ HGIV +W ME+ E + L+ PE+H L+T+ PLN +NRE AEI
Sbjct: 68 FSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIF 127
Query: 504 FESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCI 683
FE+FNVP LYI +QAVL+L A+ ++ TG+V+DSGDGVTH VP+ +G+ + I
Sbjct: 128 FETFNVPALYIQMQAVLSLYATGRT--------TGVVLDSGDGVTHAVPIVKGFAMKHAI 179
Query: 684 KHIPIAGXNITSFIQSLLR 740
+ + +AG ++T +++ LLR
Sbjct: 180 QRMDLAGRDVTEYLRVLLR 198
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 124 bits (298), Expect = 9e-29
Identities = 74/201 (36%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
Frame = +3
Query: 150 GTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEAFEATGY 329
GTG G+AG P I PS + +ST+R+ +E D +G+E +
Sbjct: 14 GTGFVKCGYAGTNFPAHIFPSMVGRPIV-----RSTQRVGN-IEIKDLMVGEECSQLRQM 67
Query: 330 -SVKYPVRHGIVEDWDLMERYIEQCVF-KYLRAEPEDHHFLMTEPPLNTPENREYLAEIM 503
+ YP+ +GIV +WD M + + L +P++ L+TEPPLN NRE + ++M
Sbjct: 68 LDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVM 127
Query: 504 FESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSGDGVTHIVPVAEGYVIGSCI 683
FE + +Y+AVQAVL L A + TG+VVDSGDGVTHI PV EG+ +
Sbjct: 128 FEQYGFNSIYVAVQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEGFALHHLT 179
Query: 684 KHIPIAGXNITSFIQSLLRER 746
+ + IAG +IT ++ LL +R
Sbjct: 180 RRLDIAGRDITKYLIKLLLQR 200
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 101 bits (243), Expect = 4e-22
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 10/226 (4%)
Frame = +3
Query: 117 GXHFPACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTA--------KVGDQSTRRMTK 272
G V G+ S +GFAG + P+ IPS IA++ + ++ +
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 273 AVEDLDFFIGDEAF--EATGYSVKYPVRHGIVEDWDLMERYIEQCVFKYLRAEPEDHHFL 446
+ +FFIG +++ ++ G++EDW+L E+ +E L + P +H L
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 447 MTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWKSRTSAERTFTGIVVDSG 626
+E N RE L EIMFE F VP Y++ VL+ A ++ G++VDSG
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH--------GLMVDSG 179
Query: 627 DGVTHIVPVAEGYVIGSCIKHIPIAGXNITSFIQSLLRERXVGIPP 764
T +VPV +GY + + PI G IT + +L ++ + + P
Sbjct: 180 ATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIP 225
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMER 386
G ++KYP+ HGIV +WD ME+
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMER 386
G ++KYP+ HGIV +WD ME+
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLMER 386
G ++KYP+ HGIV +WD ME+
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEK 85
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 132 ACVXXVGTGSXXLGFAGNKEPQFIIPSTIAIKXTAKVGDQSTRRMTKAVEDLDFFIGDEA 311
A V G+G GFAG+ P+ + PS VG + + + D ++GDEA
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEA 59
Query: 312 FEATGY-SVKYPVRHGIVEDWDLM 380
G ++KYP+ HGIV +WD M
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 603 TGIVVDSGDGVTHIVPVAEGYVIGSCIKHIPIAGXNITSFIQSLLRERXVGI 758
TG+VVD G+ V +IVPV +GYV+ S I IP + +++ L G+
Sbjct: 322 TGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGL 372
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 438 DDLRVPHGDT*TRTVRCTFPLNPSLLRYRGAQDTLQSI 325
+DL +P G+ + +F L SL ++ G +DT S+
Sbjct: 418 EDLNIPQGNNWANPIHTSFCLPKSLHKWAGRRDTSSSM 455
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,660,572
Number of Sequences: 27780
Number of extensions: 321424
Number of successful extensions: 768
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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