Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_F11
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    88   6e-18
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    68   5e-12
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    49   3e-06
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    48   4e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    47   1e-05
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    38   0.006
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    38   0.006
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    29   3.9  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    27   8.9  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 87.8 bits (208), Expect = 6e-18
 Identities = 44/82 (53%), Positives = 56/82 (68%)
 Frame = +2

Query: 98  FAQAAANVXHLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWHKLAG 277
           F  AAA V  LK  P++ +LL LYA FKQ TVGD +  + PG+ DLKGKAK+ AW +  G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 278 XSXEDAQKAYIEIVEGLIASIG 343
            + +DAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 33/83 (39%), Positives = 51/83 (61%)
 Frame = +2

Query: 86  SKSKFAQAAANVXHLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWH 265
           +++ F +A  N+  LK  P +   L LY  FKQAT GD      PG++D  G+AK+DAW+
Sbjct: 25  AQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWN 83

Query: 266 KLAGXSXEDAQKAYIEIVEGLIA 334
            L G + ++A+  Y ++V GLI+
Sbjct: 84  TLKGQTQDEARANYAKLVGGLIS 106


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = +2

Query: 158 LNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWHKLAGXSXEDAQKAYIEIVEGLIAS 337
           LN YA FKQAT G  D    P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCDLPK-PSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 338 IGLKE*KT 361
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 21/63 (33%), Positives = 39/63 (61%)
 Frame = +2

Query: 152 QLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAWHKLAGXSXEDAQKAYIEIVEGLI 331
           Q L  Y+ FKQA++GD +  + PG+  +  + K+D+W +L G S ++A++ YI+ +  + 
Sbjct: 29  QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMF 87

Query: 332 ASI 340
             I
Sbjct: 88  DKI 90


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +2

Query: 98  FAQAAANVXHLKALPTDAQLLNLYAHFKQATVGDA--DPANXPGLLDLKGKAKFDAWHKL 271
           F  AA  +  LK+ PTD + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 272 AGXSXEDAQKAYIEIVEGLIASIG 343
            G + E  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 23/85 (27%), Positives = 36/85 (42%)
 Frame = +2

Query: 83  LSKSKFAQAAANVXHLKALPTDAQLLNLYAHFKQATVGDADPANXPGLLDLKGKAKFDAW 262
           L ++KF  A   +           +L  Y  +KQA  G AD    P   +   + KF++W
Sbjct: 27  LLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSW 86

Query: 263 HKLAGXSXEDAQKAYIEIVEGLIAS 337
              +  S   A +AY E++  L  S
Sbjct: 87  LANSQMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
 Frame = +2

Query: 83  LSKSKFAQAAANVXHLKALPTDAQL-------LNLYAHFKQATVGDADPANXPGLLDLKG 241
           + KS   Q  A V  + ALP +  +       L +Y+ +KQAT G  D    P    ++ 
Sbjct: 1   MGKSLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQ-PYFFQIEQ 59

Query: 242 KAKFDAWHKLAGXSXEDAQKAYIE 313
           + K++AW++L      +A+  Y+E
Sbjct: 60  RMKWNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 233 LKGKAKFDAWHKLAGXSXEDAQKAYIEIVEGL 328
           + G  K+ AW+K  G + E+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 158 LNLYAHFKQATVGD-ADPANXPGLLDLKGKAKFDAWHKLAGXSXEDAQKAYIEIVE 322
           + L +  KQ   G+ +D  +  G LD+ G     AW +L   S ++A  +++ +V+
Sbjct: 51  IKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 81   VSPSQNLPKPQPT-XST*KLFQLMPNSLTCMPISNRPQLEMPIQP 212
            V   QN+P P P+  S+  L  + PNS    P+ + PQ    ++P
Sbjct: 1924 VGEKQNVPSPAPSDASSSNLMNMTPNS-GSNPVKHPPQAPQIVRP 1967


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +3

Query: 81  VSPSQNLPKPQPT-XST*KLFQLMPNSLTCMPISNRPQLEMPIQP 212
           V   QN+P P P+  S+  L  + PNS    P+ + PQ    ++P
Sbjct: 549 VGEKQNVPSPAPSDASSSNLMNMTPNS-GSNPVKHPPQAPQIVRP 592


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,507,637
Number of Sequences: 27780
Number of extensions: 251624
Number of successful extensions: 524
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)