Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_F10
         (697 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    28   5.5  
U64858-7|AAB18285.2|  340|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    28   7.3  
AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical ...    28   7.3  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    28   7.3  

>Z70780-15|CAA94822.2|  702|Caenorhabditis elegans Hypothetical
           protein F46B6.6a protein.
          Length = 702

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +1

Query: 235 ECIKLPCVLKKNTDQHIVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-VCDKIHT 411
           +C+++  +  +N    +      + DV+DLK +   K+  + +    V G   VC  + +
Sbjct: 295 QCVEVSALQSRNLPS-LQDALLLQADVMDLKATKKGKVEAVIIESSVVHGIGKVCTLVVS 353

Query: 412 EDDQKSGCPLKAGTNY 459
               K GC L AG+++
Sbjct: 354 RGTLKKGCVLVAGSSW 369


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = +1

Query: 283 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 447
           I +K +P   ++ LK +     FE++   +G DGT      +  K  ++  + +   L  
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344

Query: 448 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 537
           G +YI +  F I S  P I    T  ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = +1

Query: 283 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 447
           I +K +P   ++ LK +     FE++   +G DGT      +  K  ++  + +   L  
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344

Query: 448 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 537
           G +YI +  F I S  P I    T  ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
           protein F25F2.2 protein.
          Length = 4307

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = +1

Query: 283 IVIKFTPEKDVLDLKNSVSAKLFEIDLPFIGVDGTS-----VCDKIHTEDDQKSGCPLKA 447
           I +K +P   ++ LK +     FE++   +G DGT      +  K  ++  + +   L  
Sbjct: 285 ITLKDSPNDAIVGLKGNEKEHWFEVEPEVVGNDGTKELRWMLYAKNGSQVPKNTNVTLTI 344

Query: 448 GTNYIYKDTFPILSIYPSIQAEVTWALKAE 537
           G +YI +  F I S  P I    T  ++ E
Sbjct: 345 GEDYIRRSGFSI-SKKPVIPTNETVTIQIE 373


>U64858-7|AAB18285.2|  340|Caenorhabditis elegans Hypothetical
           protein C16D9.6 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 454 NYIYKDTFPILSIYPSIQAEVTWALKAED 540
           N  +K  +    IY +I +E  W LKA+D
Sbjct: 155 NLFFKSRYAFHHIYTNISSEFDWYLKADD 183


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 385 TSVCDKIHTEDDQKSGCPLKAGTNYIYKDTFPILSIYPSIQAEVTWALK 531
           T VC   +  ++Q S   L     Y++ +T  + S+Y S   + TW++K
Sbjct: 149 TGVCLPSNCHENQMSKL-LNLAKEYLFNETIHVDSVYCSHGTDSTWSVK 196


>AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical
           protein C15F1.5b protein.
          Length = 311

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 300 TRKRCLGFKKQCECEII*NRPTFYWCRRNVCLR 398
           TR+ C+G    CE E++ N P+   C  +VC++
Sbjct: 106 TRQPCMG-SLHCEGEVLRNFPSELECDHDVCIK 137


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 300 TRKRCLGFKKQCECEII*NRPTFYWCRRNVCLR 398
           TR+ C+G    CE E++ N P+   C  +VC++
Sbjct: 176 TRQPCMG-SLHCEGEVLRNFPSELECDHDVCIK 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,752,512
Number of Sequences: 27780
Number of extensions: 283499
Number of successful extensions: 581
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)