Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_F08
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   1.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.9  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 174 SQKKYHLPVVTSAPLKY 224
           S+  Y+LP +++ PLKY
Sbjct: 62  SENFYYLPAMSTGPLKY 78


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 133 VPLSSGSCTSFVVEVKK 183
           V ++  +C SFV+EV+K
Sbjct: 204 VRINPKNCASFVIEVRK 220


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +3

Query: 537 QIK*NLIQAVLK*SAKAQNSLF*LINLKSMLWGF--FDCLVK 656
           QIK NL+ A LK +    +  F +I  K+   G+  F C ++
Sbjct: 566 QIKRNLVDAPLKDTVTVPDGGFTIIRFKATNPGYWLFHCHIE 607


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,114
Number of Sequences: 336
Number of extensions: 2431
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)