Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F06
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1828 - 40174446-40174543,40175031-40175171,40176518-401767... 213 2e-55
04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712... 198 3e-51
10_08_0977 - 21985149-21985277,21985348-21985722,21985824-219858... 175 3e-44
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289... 158 4e-39
03_02_0434 + 8403630-8405666 129 3e-30
04_01_0166 - 1861750-1862181,1862317-1863873 126 2e-29
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 116 3e-26
09_06_0370 - 22610441-22610569,22610659-22611060,22611141-226111... 105 4e-23
01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496... 77 1e-14
01_06_0697 - 31301794-31302034,31302672-31303329,31303896-313040... 75 8e-14
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 60 2e-09
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 50 1e-06
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 39 0.005
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 32 0.53
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 31 0.93
08_01_0735 - 6739502-6739908,6740016-6740510,6740848-6741280 31 1.2
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 30 1.6
05_04_0176 + 18749945-18749969,18750186-18750751,18750876-187509... 29 2.8
11_06_0347 + 22555087-22555943,22556638-22558783 29 3.8
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 29 5.0
01_06_0603 + 30530486-30530984,30531174-30531202,30531484-305316... 29 5.0
04_03_1048 - 21998214-21998413,21998507-21998674,21998758-219989... 28 6.6
03_02_0582 + 9624481-9626844 28 6.6
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 28 6.6
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 28 8.7
05_01_0147 - 981697-983739 28 8.7
>01_06_1828 -
40174446-40174543,40175031-40175171,40176518-40176719,
40176815-40176914,40177029-40177081,40177951-40178097,
40178184-40178341,40178509-40178599,40179415-40179522,
40179815-40179952,40180154-40180246,40180342-40180434,
40180528-40180637,40181087-40181135,40181324-40181437,
40181530-40181589,40181674-40181742,40182034-40182135,
40182235-40182263,40182348-40182630,40183574-40183960
Length = 874
Score = 213 bits (519), Expect = 2e-55
Identities = 105/191 (54%), Positives = 141/191 (73%), Gaps = 1/191 (0%)
Frame = +3
Query: 153 ALIPVINKLQXVFNTVGADA-IQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRR 329
++IP++NKLQ +F+ +G+ + I LPQ+AV+G+QSSGKSSV+E+LVGR FLPRG I TRR
Sbjct: 27 SVIPIVNKLQDIFSQLGSSSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGSDICTRR 86
Query: 330 PLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGS 509
PL+LQLV+ P+ R A+ +EWG+FLH + + +F EIR+EI+ ETDR AG
Sbjct: 87 PLVLQLVHQPR-----RPADA---EADEWGEFLHLPGRRFYDFREIRREIQAETDREAGG 138
Query: 510 NKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSII 689
NKG+S + I LKIYS V+N+TLVDLPGITKVP+GDQP DI I +I+ YI + II
Sbjct: 139 NKGVSDKQIRLKIYSPNVLNITLVDLPGITKVPVGDQPTDIEARIRTMILSYIKHKTCII 198
Query: 690 LXVTAANTDMA 722
L V+ AN D++
Sbjct: 199 LAVSPANADLS 209
>04_03_0684 -
18670697-18670933,18671003-18671102,18671214-18671266,
18671664-18671810,18671901-18672031,18673064-18673088,
18673201-18673305,18673941-18674054,18674900-18674992,
18675101-18675193,18675951-18676057,18676442-18676490,
18677140-18677253,18677728-18677787,18677887-18677955,
18679154-18679255,18679338-18679366,18679450-18679732,
18680399-18680752
Length = 754
Score = 198 bits (484), Expect = 3e-51
Identities = 99/194 (51%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Frame = +3
Query: 150 EALIPVINKLQXVFNTV---GADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIV 320
+A+IP++N+LQ + + G ++LPQ+A +G QSSGKSSV+E+LVGR FLPRGP I
Sbjct: 19 QAVIPLVNRLQDIVARLDGGGGGGLELPQVAAIGGQSSGKSSVLEALVGRDFLPRGPDIC 78
Query: 321 TRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRM 500
TRRPL+LQLV H + EEWG+FLH + + +F++I++EI+ ETD+
Sbjct: 79 TRRPLVLQLV-------RHSAP-------EEWGEFLHAPARRFHDFDQIKREIQLETDKE 124
Query: 501 AGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPN 680
AG NKG+S + I LKI+S V+++TLVDLPGIT+VP+GDQP DI + I ++I++YI +P+
Sbjct: 125 AGGNKGVSEKQIRLKIFSPNVLDITLVDLPGITRVPVGDQPSDIESRIRSMIMQYIKHPS 184
Query: 681 SIILXVTAANTDMA 722
IIL VT AN D+A
Sbjct: 185 CIILAVTPANADLA 198
>10_08_0977 -
21985149-21985277,21985348-21985722,21985824-21985874,
21985964-21986189,21986289-21986359,21986430-21986549,
21986641-21986835,21986921-21986985,21987894-21987984,
21988700-21988761,21988854-21988904,21989172-21989273,
21989873-21989980,21990071-21990134,21990246-21990392
Length = 618
Score = 175 bits (426), Expect = 3e-44
Identities = 90/169 (53%), Positives = 119/169 (70%)
Frame = +3
Query: 219 LPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPLILQLVYSPKEGKEHRSAEEGT 398
LP +AV+G QSSGKSSV+ES+VGR FLPRG GIVTRRPL+LQL H++ E+G
Sbjct: 40 LPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQL---------HKT-EDG- 88
Query: 399 LNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSNKGISPEPINLKIYSTTVVNLTL 578
++E+ +FLH + + +F +R+EI+ ETDR+ G K ISP PI+L IYS VVNLTL
Sbjct: 89 --VQEYAEFLHMPKRRFNDFALVRKEIQDETDRLTGKTKQISPVPIHLSIYSPHVVNLTL 146
Query: 579 VDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSIILXVTAANTDMAT 725
+DLPG+TKV + QPE I I N++ Y+ PN IIL ++ AN D+AT
Sbjct: 147 IDLPGLTKVAVEGQPESIVQDIENMVRSYVDKPNCIILAISPANQDIAT 195
>05_07_0063 -
27428056-27428184,27428321-27428460,27428698-27428926,
27429231-27429281,27429411-27429636,27430230-27430300,
27430466-27430585,27430671-27430865,27431088-27431152,
27431232-27431322,27431607-27431707,27431767-27431817,
27432076-27432177,27432406-27432510,27432600-27432663,
27433023-27433151
Length = 622
Score = 158 bits (384), Expect = 4e-39
Identities = 99/215 (46%), Positives = 127/215 (59%), Gaps = 22/215 (10%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGADAIQ---------LPQIAVLGTQSSGKSSVIESLVGRSFL 299
ME LI ++NKLQ +G + LP IAV+G QSSGKSSV+ES+VG+ FL
Sbjct: 1 MENLISLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFL 60
Query: 300 PRGPGIVTRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEI 479
PRG GIVTRRPL+LQL HR + E+ +F+H K +T+F +R+EI
Sbjct: 61 PRGSGIVTRRPLVLQL---------HRIDGD-----REYAEFMHLPRKRFTDFALVRKEI 106
Query: 480 ERETDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIG-------------DQ 620
ETDR G +K IS PI+L IYS VVNLTL+DLPG+TKV +G Q
Sbjct: 107 ADETDRETGRSKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVGPFPDLPLAICFPEGQ 166
Query: 621 PEDIXNXIXNLIIKYISNPNSIILXVTAANTDMAT 725
P+ I I N++ +I PN IIL V+ AN D+AT
Sbjct: 167 PDSIVQDIENMVRSFIEKPNCIILAVSPANQDLAT 201
>03_02_0434 + 8403630-8405666
Length = 678
Score = 129 bits (311), Expect = 3e-30
Identities = 83/191 (43%), Positives = 113/191 (59%), Gaps = 1/191 (0%)
Frame = +3
Query: 156 LIPVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPL 335
L+ +++L+ + V + IQLP I V+G QSSGKSSV+ESL G S LPRG GI TR PL
Sbjct: 47 LLDAVDRLRHL--KVTQEGIQLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPL 103
Query: 336 ILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFE-EIRQEIERETDRMAGSN 512
+++L P SA+ L LE ++ ++ T E ++ I T +AGS
Sbjct: 104 VMRLQDDP-------SADSPKLQLE------YSNGRVVTTSEAKVADAINAATAEIAGSG 150
Query: 513 KGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSIIL 692
KGIS PI L + V +LTLVDLPGIT+VP+ QP+DI + I +I +YI+ SIIL
Sbjct: 151 KGISDAPITLVVRKRGVPDLTLVDLPGITRVPVQGQPDDIYDQIAKIIKEYIAPKESIIL 210
Query: 693 XVTAANTDMAT 725
V +A D T
Sbjct: 211 NVLSATVDFPT 221
>04_01_0166 - 1861750-1862181,1862317-1863873
Length = 662
Score = 126 bits (304), Expect = 2e-29
Identities = 82/190 (43%), Positives = 110/190 (57%)
Frame = +3
Query: 156 LIPVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPL 335
L+ +++L+ + V + IQLP I V+G QSSGKSSV+ESL G S LPRG GI TR PL
Sbjct: 12 LLDAVDRLRQL--NVSQEGIQLPTIVVVGDQSSGKSSVLESLAGIS-LPRGQGICTRVPL 68
Query: 336 ILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSNK 515
+++L ++ +E L LE G + + T+ E+ I T +AG K
Sbjct: 69 VMRL-------QDAGDDDEPALRLEYSGGRV-----VATSEAEVADAINAATAEIAGCGK 116
Query: 516 GISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSIILX 695
GIS PI L + V +LTLVDLPGIT+VP+ QPEDI + I +I YI+ SIIL
Sbjct: 117 GISNAPITLVVRKKGVPDLTLVDLPGITRVPVKGQPEDIYDQIAGIIKAYIAPRESIILN 176
Query: 696 VTAANTDMAT 725
V +A D T
Sbjct: 177 VLSATVDFPT 186
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 116 bits (278), Expect = 3e-26
Identities = 65/139 (46%), Positives = 86/139 (61%)
Frame = +3
Query: 309 PGIVTRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERE 488
P RRPL+LQL H++ EG +E+ +FLH K +T+F +R+EI E
Sbjct: 100 PASWIRRPLVLQL---------HKT--EGG---QEYAEFLHAPRKRFTDFAAVRKEIADE 145
Query: 489 TDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYI 668
TDR+ G K IS PI+L IYS VVNLTL+DLPG+TKV + Q E I I N++ Y+
Sbjct: 146 TDRITGKTKAISNIPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQQESIVQDIENMVRSYV 205
Query: 669 SNPNSIILXVTAANTDMAT 725
PNSIIL ++ AN D+AT
Sbjct: 206 DKPNSIILAISPANQDIAT 224
>09_06_0370 -
22610441-22610569,22610659-22611060,22611141-22611191,
22611475-22611700,22612219-22612289,22612411-22612530,
22612618-22612812,22612995-22613059,22613306-22613396,
22613611-22613672,22613796-22613846,22614326-22614427,
22614876-22614939,22615104-22615247
Length = 590
Score = 105 bits (252), Expect = 4e-23
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +3
Query: 465 IRQEIERETDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXI 644
+RQEI ETDR+ G K ISP PI+L IYS VVNLTL+DLPG+TKV + QPE + + I
Sbjct: 72 VRQEIADETDRVTGKTKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPESVVHDI 131
Query: 645 XNLIIKYISNPNSIILXVTAANTDMAT 725
N++ Y+ PN IIL ++ AN D+AT
Sbjct: 132 ENMVRSYVEKPNCIILAISPANQDIAT 158
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 219 LPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIV 320
LP IAV+G QSSGKSSV+ES+VGR FLPRG +V
Sbjct: 39 LPTIAVVGGQSSGKSSVLESIVGRDFLPRGSALV 72
>01_06_0270 +
28048449-28048577,28048915-28048978,28049537-28049638,
28049971-28050021,28050075-28050172,28050395-28050485,
28050718-28050782,28050913-28051107,28051207-28051326,
28051592-28051662,28051787-28052012,28052330-28052407,
28052507-28052735,28052958-28053097,28053571-28053699
Length = 595
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Frame = +3
Query: 465 IRQEIERETDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKV------------P 608
+R+EI ET+R G K ISP PI L IYS VV+LTL+DLPG+TKV
Sbjct: 67 VRKEIADETERATGHKKQISPVPIYLSIYSPNVVDLTLIDLPGLTKVAVVSLTNGLLRCS 126
Query: 609 IGDQPEDIXNXIXNLIIKYISNPNSIILXVTAANTDMAT 725
I Q + I I ++ +I PN IIL ++ AN D+AT
Sbjct: 127 IEGQSDSIVQDIETMVRSFIEKPNCIILAISPANQDLAT 165
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 9/69 (13%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGADAIQ---------LPQIAVLGTQSSGKSSVIESLVGRSFL 299
ME LI ++NKLQ +G + LP IAV+G QSSGKSSV+ES+VG+ FL
Sbjct: 1 MENLISLVNKLQRACTALGDHGEESALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFL 60
Query: 300 PRGPGIVTR 326
PRG +V +
Sbjct: 61 PRGSALVRK 69
>01_06_0697 -
31301794-31302034,31302672-31303329,31303896-31304091,
31304169-31304396,31304497-31304925,31305043-31305249,
31305442-31305633,31305772-31306143
Length = 840
Score = 74.5 bits (175), Expect = 8e-14
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Frame = +3
Query: 150 EALIPVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRR 329
+A N+LQ G + + +P+I +G QS GKSS++E+L+G F R + TRR
Sbjct: 46 KARFEAYNRLQAAAVAFG-EKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRR 104
Query: 330 PLILQLVYSPKE-GKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAG 506
PL+LQ+V+ P R EE + EE+G + I + I+Q E ++
Sbjct: 105 PLVLQMVHDPTALDPRCRFQEEDS---EEYGSPMVLATAI---ADLIKQRTEAHLRKIQA 158
Query: 507 SNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSI 686
+ +SP+PI ++ NLT++D PG +PE I +++ S P+ +
Sbjct: 159 A---VSPKPIVMRAEYAYCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLASPPHRL 215
Query: 687 ILXVTAANTD 716
+L + ++ +
Sbjct: 216 LLFLQQSSVE 225
>12_01_0503 -
3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/147 (27%), Positives = 70/147 (47%)
Frame = +3
Query: 156 LIPVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPL 335
L N+LQ + +G A P + V+G Q+ GKS+++E+L+G F G G TRRP+
Sbjct: 26 LYEAYNELQGLAAELGGAAAPAPAVVVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPV 85
Query: 336 ILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSNK 515
L L ++P+ G+ ++ + + +I+ IE E R+
Sbjct: 86 ALHLRFNPRCHAPRCRLLAGSGAGDDEDEEAGVAGRAMP-LADIQAYIEAENMRLENDPS 144
Query: 516 GISPEPINLKIYSTTVVNLTLVDLPGI 596
S + I ++I NLT++D PG+
Sbjct: 145 QFSEKEIIIRIEYKHCPNLTIIDTPGL 171
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/127 (29%), Positives = 64/127 (50%)
Frame = +3
Query: 237 LGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPLILQLVYSPKEGKEHRSAEEGTLNLEEW 416
LG +GKS+V+ SL+G LP G TR P+++ L P G +S L ++
Sbjct: 44 LGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQRDP--GLSSKSI---VLQIDSK 98
Query: 417 GKFLHTKDKIYTNFEEIRQEIERETDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGI 596
+ + ++ ++ + + +GS++G E INLK+ ++T L LVDLPGI
Sbjct: 99 SQQVSASSLRHS----LQDRLSKGAS--SGSSRG-RVEGINLKLRTSTAPPLKLVDLPGI 151
Query: 597 TKVPIGD 617
+ + D
Sbjct: 152 DQRAVDD 158
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 237 LGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPLILQLVYSP 359
LG +GKS+V+ SL+G LP G TR P+++ L P
Sbjct: 44 LGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQRDP 84
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 198 VGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPLILQLVYSPKEGKEH 377
V D +P IA++G + GKSS++ +LVG P T R I ++ ++G+++
Sbjct: 366 VEEDGNYIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAI-DTEFTTEDGQKY 424
Query: 378 R 380
+
Sbjct: 425 K 425
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 219 LPQIAVLGTQSSGKSSVIESLVG--RSFLPRGPGIVTRR 329
LP++A++G + GKS++ LVG R+ + PG+ R
Sbjct: 160 LPRVAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDR 198
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 465 IRQEIERETDRMAGSNKGISPEPINLKIYSTTVVNLTLVDLPGI 596
+R ++ + KG S E IN+K+ ++T L L+DLPGI
Sbjct: 91 LRHSLQDRLTKAGSFGKGRSEE-INVKLCTSTAPPLKLIDLPGI 133
>08_01_0735 - 6739502-6739908,6740016-6740510,6740848-6741280
Length = 444
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 686 NGIWVRDILNNKVX-DXVXYVFWLITYWH 603
N +W+R +LN V YVFW T WH
Sbjct: 40 NNLWLRHLLNLVVQVTLAMYVFWKSTSWH 68
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 354 SPKEGKEHRSAEEGTLNLEEWGKFLHTKDK--IYTNFEEIRQEIERETDRMAGSNKGISP 527
SP+ +E + E+ + LEE+ K L K K + EE + E+++E M + +
Sbjct: 232 SPENEEEEKEPEDKEMTLEEYEKVLEEKRKALLALKAEERKVEVDKELQAMQQLSVKKAN 291
Query: 528 EPINLKIYS 554
E + +K+ S
Sbjct: 292 EEVFIKLGS 300
>05_04_0176 +
18749945-18749969,18750186-18750751,18750876-18750944,
18752128-18752325,18752791-18752922,18753658-18753744,
18753845-18754288,18754644-18754811,18755129-18755359,
18755893-18756008,18756125-18756407
Length = 772
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 228 IAVLGTQSSGKSSVIESLVGRSFLPRGPGIVTRRPLILQLVYSPKEGKEHRSAE 389
+ +G +SGKS+ I +L+GR +L G+V I+ L YS + + E
Sbjct: 217 LVTVGEFNSGKSTFINALLGRKYLQE--GVVPTTNEIMLLSYSDVDSESAERCE 268
>11_06_0347 + 22555087-22555943,22556638-22558783
Length = 1000
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Frame = +3
Query: 168 INKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLV---GRSFLPRGPGIVTRR--- 329
+N LQ F V Q+ +A++G+ GK+++ S G F R + +++
Sbjct: 182 MNDLQRWF-MVSKQNSQISYLAIVGSGGLGKTTLAMSFYRKFGDEFDSRAFMLASQKFHL 240
Query: 330 PLILQLVYSPKEGKEHRSAEEGTLNLEEWG 419
P +L+ + S K+ ++E+ +EEWG
Sbjct: 241 PTVLRSLVSQFHQKQVSASEDALHGIEEWG 270
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 228 IAVLGTQSSGKSSVIESLVGRSF 296
++++G QSSGKS+++ L G +F
Sbjct: 43 VSIMGPQSSGKSTLLNQLFGTNF 65
>01_06_0603 +
30530486-30530984,30531174-30531202,30531484-30531660,
30533662-30533745,30534059-30534277
Length = 335
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 219 LPQIAVLGTQSSGKSSVIESLVGRSFL 299
LP+ A++G + GKSS++ SLV R L
Sbjct: 133 LPEFALVGRSNVGKSSLLNSLVRRKRL 159
>04_03_1048 -
21998214-21998413,21998507-21998674,21998758-21998977,
21999571-21999761,21999869-21999962,22000257-22000500,
22001314-22001411,22001509-22001600,22001695-22001809,
22001890-22002036,22003031-22003255
Length = 597
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 37 VFCLFCILLKKFSFRXSSTNVSLXFXHL*KCLYXFK*WKLLYQLLINYKXCSI 195
+F +FC + + + S L C+Y F + QL INYK S+
Sbjct: 441 LFLVFCFSIYSLKYEKHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSV 493
>03_02_0582 + 9624481-9626844
Length = 787
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 162 PVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGR 290
P + ++ + + + +A +AVLG SGKS++I++L R
Sbjct: 149 PELPAMRTLLDGISGEARDGEIMAVLGASGSGKSTLIDALANR 191
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 222 PQIAVLGTQSSGKSSVIESLVGR 290
P+ AVLG + GKSS+I +L+ R
Sbjct: 40 PEFAVLGRSNVGKSSLINALIRR 62
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 168 INKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGR 290
+ K + N + +A + A+LG +GKS+ +++L GR
Sbjct: 118 VKKEVYLLNDISGEAPRGQVTAILGPSGAGKSTFLDALAGR 158
>05_01_0147 - 981697-983739
Length = 680
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 228 IAVLGTQSSGKSSVIESLVGR 290
+AV+G SGKS+++++L GR
Sbjct: 71 LAVMGASGSGKSTLLDALAGR 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,966,131
Number of Sequences: 37544
Number of extensions: 285703
Number of successful extensions: 799
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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