Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F06
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 240 8e-64
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 240 8e-64
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 240 8e-64
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 205 3e-53
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 205 3e-53
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 205 3e-53
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 205 3e-53
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical pr... 30 1.9
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 240 bits (587), Expect = 8e-64
Identities = 120/195 (61%), Positives = 148/195 (75%), Gaps = 2/195 (1%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGA--DAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIV 320
ME LIPV+NKLQ VF T+G D IQLPQI V+G+QS+GKSSV+E+LVGR FLPRG GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 321 TRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRM 500
TRRPLILQL + + + R GTL ++W F HT K++T+F+ +R+EIE ETDR+
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 501 AGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPN 680
G NKGIS PI+LKIYS VV+L+LVDLPGITK+P+GDQP +I I +I+ YISNP+
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 681 SIILXVTAANTDMAT 725
SIIL VT AN D AT
Sbjct: 181 SIILAVTPANQDFAT 195
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 240 bits (587), Expect = 8e-64
Identities = 120/195 (61%), Positives = 148/195 (75%), Gaps = 2/195 (1%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGA--DAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIV 320
ME LIPV+NKLQ VF T+G D IQLPQI V+G+QS+GKSSV+E+LVGR FLPRG GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 321 TRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRM 500
TRRPLILQL + + + R GTL ++W F HT K++T+F+ +R+EIE ETDR+
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 501 AGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPN 680
G NKGIS PI+LKIYS VV+L+LVDLPGITK+P+GDQP +I I +I+ YISNP+
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 681 SIILXVTAANTDMAT 725
SIIL VT AN D AT
Sbjct: 181 SIILAVTPANQDFAT 195
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 240 bits (587), Expect = 8e-64
Identities = 120/195 (61%), Positives = 148/195 (75%), Gaps = 2/195 (1%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGA--DAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIV 320
ME LIPV+NKLQ VF T+G D IQLPQI V+G+QS+GKSSV+E+LVGR FLPRG GIV
Sbjct: 1 MENLIPVVNKLQDVFATLGRKEDQIQLPQIVVVGSQSAGKSSVLENLVGRDFLPRGTGIV 60
Query: 321 TRRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRM 500
TRRPLILQL + + + R GTL ++W F HT K++T+F+ +R+EIE ETDR+
Sbjct: 61 TRRPLILQLNHVALDDESKRRRSNGTLLTDDWAMFEHTGSKVFTDFDAVRKEIEDETDRV 120
Query: 501 AGSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPN 680
G NKGIS PI+LKIYS VV+L+LVDLPGITK+P+GDQP +I I +I+ YISNP+
Sbjct: 121 TGVNKGISLLPISLKIYSHRVVSLSLVDLPGITKIPVGDQPVNIEEQIREMILLYISNPS 180
Query: 681 SIILXVTAANTDMAT 725
SIIL VT AN D AT
Sbjct: 181 SIILAVTPANQDFAT 195
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 205 bits (500), Expect = 3e-53
Identities = 102/194 (52%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGAD-AIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVT 323
M+ALIPVIN++Q F+ +G + +LPQIAV+G QS+GKSSV+E+ VG+ FLPRG GIVT
Sbjct: 8 MQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVT 67
Query: 324 RRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMA 503
RRPLILQL+ + E+ +FLH K + +F+ +R+EIE ETDR+
Sbjct: 68 RRPLILQLIQ----------------DRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVT 111
Query: 504 GSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNS 683
G NKGISP PINL+++S V+NLTL+DLPG+TKVP+GDQP DI I ++I+ +I+
Sbjct: 112 GQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETC 171
Query: 684 IILXVTAANTDMAT 725
+IL VT AN+D+AT
Sbjct: 172 LILAVTPANSDLAT 185
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 205 bits (500), Expect = 3e-53
Identities = 102/194 (52%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGAD-AIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVT 323
M+ALIPVIN++Q F+ +G + +LPQIAV+G QS+GKSSV+E+ VG+ FLPRG GIVT
Sbjct: 8 MQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVT 67
Query: 324 RRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMA 503
RRPLILQL+ + E+ +FLH K + +F+ +R+EIE ETDR+
Sbjct: 68 RRPLILQLIQ----------------DRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVT 111
Query: 504 GSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNS 683
G NKGISP PINL+++S V+NLTL+DLPG+TKVP+GDQP DI I ++I+ +I+
Sbjct: 112 GQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETC 171
Query: 684 IILXVTAANTDMAT 725
+IL VT AN+D+AT
Sbjct: 172 LILAVTPANSDLAT 185
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 205 bits (500), Expect = 3e-53
Identities = 102/194 (52%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGAD-AIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVT 323
M+ALIPVIN++Q F+ +G + +LPQIAV+G QS+GKSSV+E+ VG+ FLPRG GIVT
Sbjct: 8 MQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVT 67
Query: 324 RRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMA 503
RRPLILQL+ + E+ +FLH K + +F+ +R+EIE ETDR+
Sbjct: 68 RRPLILQLIQ----------------DRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVT 111
Query: 504 GSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNS 683
G NKGISP PINL+++S V+NLTL+DLPG+TKVP+GDQP DI I ++I+ +I+
Sbjct: 112 GQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETC 171
Query: 684 IILXVTAANTDMAT 725
+IL VT AN+D+AT
Sbjct: 172 LILAVTPANSDLAT 185
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 205 bits (500), Expect = 3e-53
Identities = 102/194 (52%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
Frame = +3
Query: 147 MEALIPVINKLQXVFNTVGAD-AIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPGIVT 323
M+ALIPVIN++Q F+ +G + +LPQIAV+G QS+GKSSV+E+ VG+ FLPRG GIVT
Sbjct: 8 MQALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVT 67
Query: 324 RRPLILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMA 503
RRPLILQL+ + E+ +FLH K + +F+ +R+EIE ETDR+
Sbjct: 68 RRPLILQLIQ----------------DRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVT 111
Query: 504 GSNKGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNS 683
G NKGISP PINL+++S V+NLTL+DLPG+TKVP+GDQP DI I ++I+ +I+
Sbjct: 112 GQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETC 171
Query: 684 IILXVTAANTDMAT 725
+IL VT AN+D+AT
Sbjct: 172 LILAVTPANSDLAT 185
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 76.2 bits (179), Expect = 2e-14
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 1/188 (0%)
Frame = +3
Query: 156 LIPVINKLQXVFNTVGADAIQLPQIAVLGTQSSGKSSVIESLVGRSFLPRGPG-IVTRRP 332
++ ++N+ +NT + LP++ V+G QS+GK+SV+E + PRG G ++TR P
Sbjct: 270 VLDLLNEYDSSYNT----SDNLPRVVVVGDQSAGKTSVLEMVAQARIFPRGSGEMMTRAP 325
Query: 333 LILQLVYSPKEGKEHRSAEEGTLNLEEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSN 512
+ + L P + R + +F TK+ T+ +++R E E
Sbjct: 326 VKVTLSEGPYHVAQFRDSSR---------EFDLTKE---TDLQQLRNETEVRMRNSVRDG 373
Query: 513 KGISPEPINLKIYSTTVVNLTLVDLPGITKVPIGDQPEDIXNXIXNLIIKYISNPNSIIL 692
K +S E I+L + + + LVDLPG+ D + + I + ++ NPN+IIL
Sbjct: 374 KTVSNEVISLTVKGPNLPRMVLVDLPGVISTVTADMARETKDDIIRMSKAHMENPNAIIL 433
Query: 693 XVTAANTD 716
+ + D
Sbjct: 434 CIQDGSVD 441
>Z78544-2|CAB01758.1| 368|Caenorhabditis elegans Hypothetical
protein K04G11.3 protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 408 EEWGKFLHTKDKIYTNFEEIRQEIERETDRMAGSNKGISPEPINLKIYST 557
E W K L ++K ++ + EI E +R AG+N+ SPEP ++ +T
Sbjct: 167 EFWQKLLQFEEKSNKQVKKPQCEISME-NRQAGNNEMTSPEPTYKELSNT 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,117,442
Number of Sequences: 27780
Number of extensions: 262537
Number of successful extensions: 830
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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