Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_F02
(784 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533455-1|CAG38486.1| 206|Homo sapiens RAB18 protein. 33 1.5
BT009840-1|AAP88842.1| 206|Homo sapiens RAB18, member RAS oncog... 33 1.5
BC029350-1|AAH29350.1| 206|Homo sapiens RAB18, member RAS oncog... 33 1.5
BC015014-1|AAH15014.1| 206|Homo sapiens RAB18, member RAS oncog... 33 1.5
AY574034-1|AAU08232.1| 235|Homo sapiens RAB18 long isoform 1 pr... 33 1.5
AL138920-3|CAH70592.1| 290|Homo sapiens RAB18, member RAS oncog... 33 1.5
AL138920-2|CAH70591.1| 161|Homo sapiens RAB18, member RAS oncog... 33 1.5
AL138920-1|CAH70590.1| 206|Homo sapiens RAB18, member RAS oncog... 33 1.5
AK223153-1|BAD96873.1| 206|Homo sapiens RAB18, member RAS oncog... 33 1.5
AJ277145-1|CAB86486.1| 206|Homo sapiens ras-related small GTPas... 33 1.5
AF498950-1|AAM21098.1| 206|Homo sapiens small GTP binding prote... 33 1.5
AF137372-1|AAF61433.1| 206|Homo sapiens ras-related protein RAB... 33 1.5
AF136974-1|AAG49435.1| 206|Homo sapiens ras-related protein 18 ... 33 1.5
AF087860-1|AAP97170.1| 206|Homo sapiens rab18 protein. 33 1.5
AB209698-1|BAD92935.1| 127|Homo sapiens RAB18, member RAS oncog... 33 1.5
>CR533455-1|CAG38486.1| 206|Homo sapiens RAB18 protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>BT009840-1|AAP88842.1| 206|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>BC029350-1|AAH29350.1| 206|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>BC015014-1|AAH15014.1| 206|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AY574034-1|AAU08232.1| 235|Homo sapiens RAB18 long isoform 1
protein.
Length = 235
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 126 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 180
>AL138920-3|CAH70592.1| 290|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 290
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 209 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 263
>AL138920-2|CAH70591.1| 161|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 161
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 52 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 106
>AL138920-1|CAH70590.1| 206|Homo sapiens RAB18, member RAS oncogene
family protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AK223153-1|BAD96873.1| 206|Homo sapiens RAB18, member RAS oncogene
family variant protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AJ277145-1|CAB86486.1| 206|Homo sapiens ras-related small GTPase
RAB18 protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AF498950-1|AAM21098.1| 206|Homo sapiens small GTP binding protein
RAB18 protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AF137372-1|AAF61433.1| 206|Homo sapiens ras-related protein RAB18
protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AF136974-1|AAG49435.1| 206|Homo sapiens ras-related protein 18
protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AF087860-1|AAP97170.1| 206|Homo sapiens rab18 protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
>AB209698-1|BAD92935.1| 127|Homo sapiens RAB18, member RAS oncogene
family variant protein.
Length = 127
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 527 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 688
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 18 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,533,887
Number of Sequences: 237096
Number of extensions: 1500501
Number of successful extensions: 5718
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5718
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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