Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E18
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.40 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 146 CADV-QFHRCHCHRXFGKEYFRSQRN 220
           C D+   HRCHC   +   Y +++ N
Sbjct: 161 CEDIGNSHRCHCSDGYSGSYCQTEIN 186


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 54  PXHSFGPSSKMVSXNPIRLL 113
           P HS  PSS ++  N I+ L
Sbjct: 348 PSHSIYPSSNLMPLNNIQNL 367


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 457 SLLVGELLLMQPNKLLXKL 513
           SL + E +LMQ NKL+  L
Sbjct: 162 SLALIEYILMQTNKLVLAL 180


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 457 SLLVGELLLMQPNKLLXKL 513
           SL + E +LMQ NKL+  L
Sbjct: 162 SLALIEYILMQTNKLVLAL 180


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 457 SLLVGELLLMQPNKLLXKL 513
           SL + E +LMQ NKL+  L
Sbjct: 162 SLALIEYILMQTNKLVLAL 180


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 448 GCSFCSINFSASRSNSA 398
           GC  CS+ FS S    A
Sbjct: 220 GCEHCSMKFSDSNQLKA 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,188
Number of Sequences: 336
Number of extensions: 1723
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)