Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E17
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1; ... 109 3e-23
UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8; Bilater... 106 2e-22
UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10; Euther... 105 6e-22
UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42; Coelom... 99 2e-20
UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8; Metazoa... 94 1e-18
UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28; Fungi/... 83 3e-15
UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17; Dikary... 79 4e-14
UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7; Eukaryo... 69 5e-11
UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11; Euka... 66 3e-10
UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4; Arabi... 60 2e-08
UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lambl... 60 3e-08
UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whol... 56 4e-07
UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago t... 55 8e-07
UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=... 55 8e-07
UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|R... 55 8e-07
UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14; Eukary... 55 8e-07
UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8; Eukaryo... 54 2e-06
UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1; ... 52 4e-06
UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Ho... 51 1e-05
UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S riboso... 48 7e-05
UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillar... 46 3e-04
UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1; Ostre... 38 0.10
UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa di... 38 0.13
UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133, w... 37 0.23
UniRef50_A0VAR1 Cluster: Putative uncharacterized protein precur... 33 3.8
>UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 95
Score = 109 bits (262), Expect = 3e-23
Identities = 51/87 (58%), Positives = 64/87 (73%)
Frame = +2
Query: 50 GRPSQMXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVV 229
GR S+ + AG FV L CPR CS+S R+IHAKDHA +Q+ I DV P TGR +TS +Y +
Sbjct: 10 GRSSK--NDAGGFVDLYCPRKCSSSKRIIHAKDHALIQINIVDVNPVTGRMLETSTVYAI 67
Query: 230 CGAIRRMGESDDCIVRLTKKDGILAKN 310
C IRR+GESDDCIVRL KK+ ++KN
Sbjct: 68 CDVIRRLGESDDCIVRLAKKNLKISKN 94
>UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8;
Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens
(Human)
Length = 83
Score = 106 bits (255), Expect = 2e-22
Identities = 50/83 (60%), Positives = 61/83 (73%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + AG FV L PR CSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10;
Eutheria|Rep: 40S ribosomal protein S21 - Mus musculus
(Mouse)
Length = 83
Score = 105 bits (251), Expect = 6e-22
Identities = 50/83 (60%), Positives = 61/83 (73%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + AG FV L PR CSASNR+I AKDHAS+Q+ +A+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60
Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42;
Coelomata|Rep: 40S ribosomal protein S21 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 81
Score = 99 bits (238), Expect = 2e-20
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + AG FV L PR CSASNR+I AKDHAS+Q+ IA+V TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDRVTGRFNGQFKTYAICGAIR 60
Query: 245 RMGESDDCIVRLTKKDGILAK 307
RMGE+DD ++RL K D I+AK
Sbjct: 61 RMGEADDSLLRLAKTDSIVAK 81
>UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8;
Metazoa|Rep: 40S ribosomal protein S21 - Caenorhabditis
elegans
Length = 88
Score = 93.9 bits (223), Expect = 1e-18
Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGR-AADTSKMYVVCGAI 241
M + AG V L PR CS+SNR+I KDHASVQ+ DV P TGR S Y +CGAI
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 242 RRMGESDDCIVRLTKKDGILAKN 310
RRMGESDD I+RL +KDG++ ++
Sbjct: 61 RRMGESDDAILRLAQKDGLVPRD 83
>UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28;
Fungi/Metazoa group|Rep: 40S ribosomal protein S21 -
Botryotinia fuckeliana B05.10
Length = 88
Score = 83.0 bits (196), Expect = 3e-15
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + G V L PR CSA+NR+I AKDH SVQ+ IA V GRA +++Y +CG IR
Sbjct: 1 MENDKGELVDLYVPRKCSATNRIIKAKDHGSVQISIAKVDE-NGRATGENQVYALCGFIR 59
Query: 245 RMGESDDCIVRLTKKDGIL 301
MGESDD + RL ++DG+L
Sbjct: 60 AMGESDDSLNRLAQRDGLL 78
>UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17;
Dikarya|Rep: 40S ribosomal protein S21 -
Schizosaccharomyces pombe (Fission yeast)
Length = 87
Score = 79.0 bits (186), Expect = 4e-14
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKM-YVVCGAI 241
M + AG V L PR CSA+NR+I AKDHASVQ+ + V A GR K Y + G +
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVD-AEGRQIPGEKTTYAISGFV 59
Query: 242 RRMGESDDCIVRLTKKDGIL 301
R GESDDCI RLT +DG+L
Sbjct: 60 RSKGESDDCINRLTTQDGLL 79
>UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7;
Eukaryota|Rep: 40S ribosomal protein S21 - Cyanophora
paradoxa
Length = 82
Score = 68.9 bits (161), Expect = 5e-11
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + G V L PR CSA+NRLI A DHA+VQ+ + V P +G + +CG +R
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 245 RMGESDDCIVRLTKKDGI 298
MGESD + RL K G+
Sbjct: 61 SMGESDAALNRLCVKHGL 78
>UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11;
Eukaryota|Rep: 40S ribosomal protein S21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 66.5 bits (155), Expect = 3e-10
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKM-YVVCGAI 241
M + G V L PR CSA+NR+I A DHASVQ+ +A V GRA + Y + G +
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKV-DEEGRAIPGEYVTYALSGYV 59
Query: 242 RRMGESDDCIVRLTKKDGIL 301
R GESDD + RL + DG+L
Sbjct: 60 RSRGESDDSLNRLAQNDGLL 79
>UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4;
Arabidopsis thaliana|Rep: 40S ribosomal protein S21-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 60.1 bits (139), Expect = 2e-08
Identities = 33/81 (40%), Positives = 45/81 (55%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + G L PR CSA+NRLI +KDHASVQL I + A G + +CG +R
Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHL-DANGLYTGQFTTFALCGFVR 59
Query: 245 RMGESDDCIVRLTKKDGILAK 307
G++D + RL +K + AK
Sbjct: 60 AQGDADSGVDRLWQKKKVEAK 80
>UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_72066_72335 - Giardia lamblia
ATCC 50803
Length = 89
Score = 59.7 bits (138), Expect = 3e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M +++G V PR CSA+NRLI KDHA+VQL +A V + + CGAIR
Sbjct: 8 MKNSSGVVVDAYIPRKCSATNRLIGPKDHAAVQLSVARVNDKGKMIENNYVTFAFCGAIR 67
Query: 245 RMGESDDCIVRLTKKDGILAK 307
G D + L ++ G++ +
Sbjct: 68 SRGGVDSAFMLLAQEHGLMER 88
>UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whole
genome shotgun sequence; n=2; Deuterostomia|Rep:
Chromosome undetermined SCAF15610, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 51
Score = 56.0 bits (129), Expect = 4e-07
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +2
Query: 164 LVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 307
L + V TGR K Y +CGAIRRMGESDD I+RL K D ++AK
Sbjct: 4 LHLPQVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKNDSVIAK 51
>UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago
truncatula|Rep: Ribosomal protein S21e - Medicago
truncatula (Barrel medic)
Length = 106
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +2
Query: 62 QMXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAI 241
+M + G L PR CSA+NRLI AKDHASVQ+ + + +G + +CG
Sbjct: 25 KMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHL-DESGVYNGQFSTFALCGFT 83
Query: 242 RRMGESDDCIVRLTKK 289
R G++D I RL +K
Sbjct: 84 RAQGDADSGIDRLWQK 99
>UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=4;
Trypanosoma cruzi|Rep: 40S ribosomal protein S21,
putative - Trypanosoma cruzi
Length = 251
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +2
Query: 80 GAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGES 259
G V L PR C A+N LI + DH++VQ+ IA+V A G T+ + + G +RR ES
Sbjct: 11 GVNVDLYIPRKCHATNNLITSYDHSAVQIAIANV-DANGVLNGTTTTFCIAGYLRRQAES 69
Query: 260 DDCIVRLTKKDGIL 301
D I L GI+
Sbjct: 70 DHAINHLAISKGII 83
>UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|Rep:
Ribosomal protein S21 - Homo sapiens (Human)
Length = 66
Score = 54.8 bits (126), Expect = 8e-07
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGR 199
M + AG FV L PR CSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14;
Eukaryota|Rep: 40S ribosomal protein S21 - Oryza sativa
subsp. japonica (Rice)
Length = 82
Score = 54.8 bits (126), Expect = 8e-07
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + G V L PR CSA+NR+I AKDHASVQ+ I V G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHV-DENGLYDGRFTTFALSGFIR 59
Query: 245 RMGESDDCIVRLTKK 289
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8;
Eukaryota|Rep: 40S ribosomal protein S21 - Zea mays
(Maize)
Length = 81
Score = 53.6 bits (123), Expect = 2e-06
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
M + G V L PR CSA+NR+I AKDHASVQ+ I + A G + + G +R
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHL-DANGLYDGHFTTFALSGFVR 59
Query: 245 RMGESDDCIVRLTKK 289
G++D + RL +K
Sbjct: 60 AQGDADSSLDRLWQK 74
>UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S21 - Entamoeba histolytica HM-1:IMSS
Length = 86
Score = 52.4 bits (120), Expect = 4e-06
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 74 AAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMG 253
A+ + L PR CS ++ LI A DHA+VQ+++ V G S +Y V G++R+ G
Sbjct: 2 ASNKKIELYIPRHCSVTHTLIAADDHAAVQILVPHVN-ENGVILPESTVYTVKGSVRKDG 60
Query: 254 ESDDCIVRLTKKDGIL 301
SD + R +KDG L
Sbjct: 61 ISDHSLNRQFQKDGFL 76
>UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Homo
sapiens|Rep: 8.2 kDa differentiation factor - Homo
sapiens (Human)
Length = 97
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 65 MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCG 235
M + AG FV L PR CSASNR+I AKDHAS+Q+ +A + + + K+ + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVARLTRSQAGLMASLKLMLSAG 57
>UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S ribosomal
protein S21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S21 - Rattus norvegicus
Length = 326
Score = 48.4 bits (110), Expect = 7e-05
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = +2
Query: 77 AGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATG 196
AG FV L PR CS+SN +I KDH S+QL +A V +TG
Sbjct: 265 AGEFVDLYVPRKCSSSNHIITVKDHTSIQLNVAKVDRSTG 304
>UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillardia
theta|Rep: 40S ribosomal protein S21 - Guillardia theta
(Cryptomonas phi)
Length = 82
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = +2
Query: 104 PRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRLT 283
PR CS SN+LI+ KDHAS+Q+ I V ++ G +R+ G+SD IV L
Sbjct: 14 PRKCSLSNKLINNKDHASIQISIG-VLDKNDLFKGEYDIFAFSGLMRKKGKSDYAIVNLI 72
Query: 284 KK 289
+K
Sbjct: 73 EK 74
>UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S21-maize -
Ostreococcus tauri
Length = 101
Score = 37.9 bits (84), Expect = 0.10
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +2
Query: 53 RPSQMXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQL 166
R M +A G V L PR CS +NRLI A D ASVQL
Sbjct: 25 RYDDMINADGENVDLYIPRKCSWTNRLITATDKASVQL 62
>UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa
differentiation factor, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to 8.2 kDa
differentiation factor, partial - Pan troglodytes
Length = 60
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +2
Query: 77 AGAFVXLXCPRXCSASNRLIHAKDHASVQLVIA 175
A FV L PR CS S+ +I AKDH S+Q+ +A
Sbjct: 3 ASEFVDLYIPRKCSTSHHVIGAKDHTSMQMNMA 35
>UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 36.7 bits (81), Expect = 0.23
Identities = 20/85 (23%), Positives = 44/85 (51%)
Frame = +2
Query: 89 VXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDC 268
V + PR C +N ++++ D++SVQ+ + V G + ++ G +R+ G+S
Sbjct: 9 VDIYVPRKCQYTNMILNSSDYSSVQINVGQV-DENGVYNKKNNTVILAGYLRQKGQSAAA 67
Query: 269 IVRLTKKDGILAKNY*HLVRQTTIL 343
+ + ++ G+ + HL +T I+
Sbjct: 68 LEAILRQRGV----FYHLHNETNII 88
>UniRef50_A0VAR1 Cluster: Putative uncharacterized protein
precursor; n=1; Delftia acidovorans SPH-1|Rep: Putative
uncharacterized protein precursor - Delftia acidovorans
SPH-1
Length = 662
Score = 32.7 bits (71), Expect = 3.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 86 MHRRRXAFEMDVHTGHGIDRCEKKESAG 3
+HRRR AF++ H DRC +E AG
Sbjct: 606 VHRRRTAFQLPGHPQRETDRCHGREQAG 633
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,400,525
Number of Sequences: 1657284
Number of extensions: 6200782
Number of successful extensions: 12767
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12763
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -