Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E17
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   3.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   5.0  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   5.0  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   5.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.0  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   5.0  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 83  AFVXLXCPRXCSASNR 130
           AF+ L CP  C+ +NR
Sbjct: 676 AFMHLGCPHGCNDANR 691


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 16  FFSHLSIPCP 45
           FFS L IPCP
Sbjct: 334 FFSQLGIPCP 343


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 16  FFSHLSIPCP 45
           FFS L IPCP
Sbjct: 334 FFSQLGIPCP 343


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 16  FFSHLSIPCP 45
           FFS L IPCP
Sbjct: 312 FFSQLGIPCP 321


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +1

Query: 61   SNAXRRRCIRXLVLPEXMLGQQPPHPR*GPCFSTASDC 174
            S   R R    L  P    G+  P  R    F+T SDC
Sbjct: 991  SRTLRSRETLRLAQPRSSAGRSDPMFRMSAVFNTVSDC 1028


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 47  CGRPSQMXHAAGAFVXLXCPR 109
           CG  SQ  HA G+++   CPR
Sbjct: 321 CGTRSQNLHATGSYM---CPR 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,320
Number of Sequences: 2352
Number of extensions: 6580
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)