Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E17
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015189-1|AAT94418.1|   83|Drosophila melanogaster RH57501p pro...   123   1e-28
AJ009557-1|CAA08751.1|   83|Drosophila melanogaster ribosomal pr...   123   1e-28
AE014134-497|AAN10394.1|   83|Drosophila melanogaster CG2986-PD,...   123   1e-28
AE014134-496|AAN10393.1|   83|Drosophila melanogaster CG2986-PC,...   123   1e-28
AE014134-495|AAN10392.1|   83|Drosophila melanogaster CG2986-PB,...   123   1e-28
AE014134-494|AAF51191.1|   83|Drosophila melanogaster CG2986-PA,...   123   1e-28
BT030210-1|ABN49349.1|  158|Drosophila melanogaster IP18075p pro...    77   1e-14

>BT015189-1|AAT94418.1|   83|Drosophila melanogaster RH57501p
           protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>AJ009557-1|CAA08751.1|   83|Drosophila melanogaster ribosomal
           protein S21 protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>AE014134-497|AAN10394.1|   83|Drosophila melanogaster CG2986-PD,
           isoform D protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>AE014134-496|AAN10393.1|   83|Drosophila melanogaster CG2986-PC,
           isoform C protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>AE014134-495|AAN10392.1|   83|Drosophila melanogaster CG2986-PB,
           isoform B protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>AE014134-494|AAF51191.1|   83|Drosophila melanogaster CG2986-PA,
           isoform A protein.
          Length = 83

 Score =  123 bits (297), Expect = 1e-28
 Identities = 58/83 (69%), Positives = 63/83 (75%)
 Frame = +2

Query: 65  MXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVVCGAIR 244
           M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +CG IR
Sbjct: 1   MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICGEIR 60

Query: 245 RMGESDDCIVRLTKKDGILAKNY 313
           RMGESDDCIVRL KKDGI+ KN+
Sbjct: 61  RMGESDDCIVRLAKKDGIITKNF 83


>BT030210-1|ABN49349.1|  158|Drosophila melanogaster IP18075p
           protein.
          Length = 158

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 36/59 (61%), Positives = 42/59 (71%)
 Frame = +2

Query: 53  RPSQMXHAAGAFVXLXCPRXCSASNRLIHAKDHASVQLVIADVXPATGRAADTSKMYVV 229
           +P++M + AG  V L  PR CSASNR+IHAKDHASVQL I DV P TGR  D SK Y +
Sbjct: 13  KPNKMENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAI 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,077,955
Number of Sequences: 53049
Number of extensions: 301163
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)