Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E16
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       34   0.001
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   6.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 7/146 (4%)
 Frame = +3

Query: 135 VFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXXXXXX 314
           V +D ++KF+++  L   T+          F  +  P  V++D GTQF S          
Sbjct: 221 VVIDVFSKFLKLYPLRKATAKIAAKRLIEDFSGYIKPKCVLSDHGTQFISNTWQNSLRAA 280

Query: 315 XXXHIKSSPKHSQSNGLSESGVKIFKNILRK-CNEDGSDPYLGLLNYRNTPKPYMP---- 479
                 SS +H +SN  SE  ++    I R  C E+ +     L N  +    Y+P    
Sbjct: 281 DIQPTLSSIRHPESNP-SERVMRELGRIFRAYCRENHASWVNHLSNIEDCLN-YVPHIST 338

Query: 480 --SPAQLLYSRNLNSLIPVPRSTLKP 551
             SP ++LY R   + +    S L P
Sbjct: 339 GFSPYEILYGRTPPNPLDAVTSGLLP 364


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 436 RYGSEPSSLHFLRIFLNIF 380
           R+ +  S  H+LR+F  +F
Sbjct: 515 RFNNYQSLAHYLRVFFTVF 533


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 645 VLIGVILLHICHNSFL 598
           +L   + LH+C NS++
Sbjct: 53  ILTSSVTLHVCFNSYM 68


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 448 FSKPRYGSEPSSLHFLRIFLNIFT 377
           F+  R    PSSL F    L+IFT
Sbjct: 305 FTPDRSKFRPSSLRFCLNILSIFT 328


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 607 IMTNVQKNYPN*NFTKR 657
           I  N++KN  N NFTK+
Sbjct: 38  ITINIRKNGLNYNFTKK 54


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 448 FSKPRYGSEPSSLHFLRIFLNIFT 377
           F+  R    PSSL F    L+IFT
Sbjct: 30  FTPDRSKFRPSSLRFCLNILSIFT 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,487
Number of Sequences: 336
Number of extensions: 4000
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)