Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E16
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.4  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    24   4.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +3

Query: 543 LKPKLFYCDSKYYNHLNSVKKNYDKCAKELPQLKLHQEVYFKKTLXSNWQKGKIIKN 713
           LK K     SKY  HL+SV +      ++  Q +L  E+  K  +  N++K +  KN
Sbjct: 388 LKQKADATSSKYLIHLDSVNRE-----QKSDQDRLDSEINKKAQIEENYKKIESEKN 439


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 274 CVPQSVTTNDGMPCLP 227
           C P  + ++DG PC+P
Sbjct: 174 CKPSYIRSSDGGPCIP 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,421
Number of Sequences: 2352
Number of extensions: 14357
Number of successful extensions: 55
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)