Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E16
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033390-1|AAH33390.1|  439|Homo sapiens KRBA2 protein protein.        33   1.1  
AK131219-1|BAD18406.1|  492|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AF480924-3|AAM81188.1|  863|Homo sapiens pol protein protein.          31   3.4  
BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.    31   6.0  
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.     31   6.0  

>BC033390-1|AAH33390.1|  439|Homo sapiens KRBA2 protein protein.
          Length = 439

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
 Frame = +3

Query: 123 KDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXX 302
           K  L + D+ TKFI +  L    +  V+     IF   G PS + +D G +FT+      
Sbjct: 226 KFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHEL 285

Query: 303 XXXXXXXHIKSSPKH-SQSNGLSESGVKIFKNIL 401
                   I S   H  QS G  E   +  KN++
Sbjct: 286 NELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMI 319


>AK131219-1|BAD18406.1|  492|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16113 fis, clone 3NB692004724. ).
          Length = 492

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
 Frame = +3

Query: 123 KDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXX 302
           K  L + D+ TKFI +  L    +  V+     IF   G PS + +D G +FT+      
Sbjct: 279 KFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHEL 338

Query: 303 XXXXXXXHIKSSPKH-SQSNGLSESGVKIFKNIL 401
                   I S   H  QS G  E   +  KN++
Sbjct: 339 NELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMI 372


>AF480924-3|AAM81188.1|  863|Homo sapiens pol protein protein.
          Length = 863

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 20/91 (21%), Positives = 34/91 (37%)
 Frame = +3

Query: 135 VFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXXXXXX 314
           V +D Y+  +    ++      VI +C   F   G+P  +  D  + +TS          
Sbjct: 664 VTVDTYSGVVMATAMNKEGVQQVIQHCLQAFAAWGVPHVIKMDNSSAYTSTRFAAFLKEF 723

Query: 315 XXXHIKSSPKHSQSNGLSESGVKIFKNILRK 407
              HI S P + Q   +        KN++ K
Sbjct: 724 RISHITSIPYNPQGQAVVGHTHLYLKNLIIK 754


>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
          Length = 1581

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 465 KPYMPSPAQLLYSRN-LNSLIPVPRSTLKPKLFYCDSKYYNHLNSVKKNYDKCAK 626
           KP  PS  QLL   N L  L+   +  +KP++     KY N+ + V +  +K +K
Sbjct: 245 KPDWPSAKQLLGDSNFLKRLLEYDKENIKPQILAKLQKYINNPDFVPEKVEKVSK 299


>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
          Length = 2182

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 465  KPYMPSPAQLLYSRN-LNSLIPVPRSTLKPKLFYCDSKYYNHLNSVKKNYDKCAK 626
            KP  PS  QLL   N L  L+   +  +KP++     KY N+ + V +  +K +K
Sbjct: 846  KPDWPSAKQLLGDSNFLKRLLEYDKENIKPQILAKLQKYINNPDFVPEKVEKVSK 900


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,419,651
Number of Sequences: 237096
Number of extensions: 1981012
Number of successful extensions: 7210
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7210
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)