Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E16
(768 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 39 0.009
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 32 0.75
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 32 0.75
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 32 0.75
BT011365-1|AAR96157.1| 849|Drosophila melanogaster RE64484p pro... 32 0.99
AE013599-1986|AAF58179.1| 849|Drosophila melanogaster CG10255-P... 32 0.99
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 31 1.3
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 31 1.7
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +3
Query: 123 KDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXX 302
K LV +D +TKF+ + + VI + F + P +++D G FTS
Sbjct: 1286 KHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFDSF 1345
Query: 303 XXXXXXXHIKSSPKHSQSNGLSE 371
HIK + Q+NG E
Sbjct: 1346 LKECNVKHIKIATGSPQANGQVE 1368
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 32.3 bits (70), Expect = 0.75
Identities = 22/99 (22%), Positives = 41/99 (41%)
Frame = +3
Query: 123 KDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXX 302
K L +D ++KF+ + + + V+ G P +V+D GT FTS
Sbjct: 1057 KYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQF 1116
Query: 303 XXXXXXXHIKSSPKHSQSNGLSESGVKIFKNILRKCNED 419
H+ ++ ++ NG E ++ I+ K + D
Sbjct: 1117 MSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSD 1155
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 120 NKDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKS-IFGRHGIPSFVVTDCGTQFTSXXXX 296
N LV +D ++K+ E+ + T++ + + I R+G+P ++TD Q T
Sbjct: 180 NSMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMITDNNVQLTIRAFR 239
Query: 297 XXXXXXXXXHIKSSPKHSQSN 359
H ++P Q N
Sbjct: 240 KFLEELGVRHQLTAPYTPQEN 260
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 32.3 bits (70), Expect = 0.75
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 117 NNKDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQF 278
NN L +D ++KF V + N I K+ F + G+P ++ D G +F
Sbjct: 938 NNNFNLTIIDKFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLPKKLIHDQGVEF 991
>BT011365-1|AAR96157.1| 849|Drosophila melanogaster RE64484p
protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.99
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 444 LNYRNTPKPYMPSPAQLLYSRNLNSL-IPVPR-STLKPKLFYCDSKYYNHLNSVKKNYDK 617
L+Y NTP P Q + R L L + R L P+LFYC H+NS N +
Sbjct: 22 LDYSNTPLTDFPEVWQ--HERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNS--NNLES 77
Query: 618 CAKELPQLKLHQEVYFKKTLXSNWQKGKIIKNC 716
+ + L+ Q + + L N + IK+C
Sbjct: 78 IPQAIGSLRQLQHLDLNRNLIVNVPEE--IKSC 108
>AE013599-1986|AAF58179.1| 849|Drosophila melanogaster CG10255-PA
protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.99
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +3
Query: 444 LNYRNTPKPYMPSPAQLLYSRNLNSL-IPVPR-STLKPKLFYCDSKYYNHLNSVKKNYDK 617
L+Y NTP P Q + R L L + R L P+LFYC H+NS N +
Sbjct: 22 LDYSNTPLTDFPEVWQ--HERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNS--NNLES 77
Query: 618 CAKELPQLKLHQEVYFKKTLXSNWQKGKIIKNC 716
+ + L+ Q + + L N + IK+C
Sbjct: 78 IPQAIGSLRQLQHLDLNRNLIVNVPEE--IKSC 108
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 120 NKDY-LVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTS 284
NK+Y L +D ++KF + N V+ K + GIP ++ D G +F S
Sbjct: 827 NKNYNLTIIDKFSKFAAAYPITNRNCINVVKALKHFISQFGIPKKLIYDQGAEFAS 882
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/99 (22%), Positives = 41/99 (41%)
Frame = +3
Query: 123 KDYLVFMDYYTKFIEVCKLDNLTSDCVIVNCKSIFGRHGIPSFVVTDCGTQFTSXXXXXX 302
K L +D ++KF+ + + + V+ G P +V+D GT FTS
Sbjct: 750 KYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQF 809
Query: 303 XXXXXXXHIKSSPKHSQSNGLSESGVKIFKNILRKCNED 419
H+ ++ ++ NG E ++ I+ K + D
Sbjct: 810 MSSHNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSSD 848
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,382,525
Number of Sequences: 53049
Number of extensions: 612610
Number of successful extensions: 1438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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