Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E15
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36.10 |||mitochondrial intermembrane space protein sorting p... 113 2e-26
SPAP8A3.10 |||mitochondrial intermembrane space protein sorting ... 69 9e-13
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.51
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 29 0.89
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 28 1.6
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 2.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.7
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 2.7
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 27 3.6
SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy... 26 6.3
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPAC21E11.07 ||SPAC2C4.01|glycine cleavage T-protein|Schizosacch... 26 6.3
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 8.3
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 8.3
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 25 8.3
>SPBC36.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 113 bits (272), Expect = 2e-26
Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Frame = +2
Query: 2 HTFNHPWXTVAQAAWRKYPNPMNPAVIGTDVVERKVVD-GVLHTHRLVSSKWFFPRWAQA 178
H F +P+ V+ A W+KYPN VI D ++RKV+D GVL+T RL++ PRW
Sbjct: 8 HLFQYPFEQVSAAHWQKYPNEHATHVIAVDTLDRKVLDNGVLYTERLITCHQALPRWILK 67
Query: 179 LIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQEA 358
LI A+ CY E S V+ R +TL T+NLTF + VDETV Y+PHP + T+ +QEA
Sbjct: 68 LIDGAQDCYIRETSYVDLKARTLTLLTSNLTFSDRLRVDETVTYSPHP-ELEATVFQQEA 126
Query: 359 VVTVQGV--PLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEI 487
+ LS+ +E + A +G++ E V+ K + +
Sbjct: 127 RIEALACMKRLSNLIEQWSVDGFGKKASRGKEGFESVLEKINMSV 171
>SPAP8A3.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 68.5 bits (160), Expect = 9e-13
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 NHPWXTVAQAAWRKYPNPMNPAVIGTDVVERKVVD-GVLHTHRLVSSKWFFPRWAQALIG 187
N W TV+ A +YPNP + V+ DV+ER V D G L+T RL+ + PRWA L+
Sbjct: 12 NASWNTVSSAWLTRYPNPYSLHVVSADVLERYVDDEGRLYTERLLVKQGRLPRWASDLLN 71
Query: 188 TAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKTLL 346
K Y E S ++P ++++ +T NL + V E R+ + SKT++
Sbjct: 72 VNK-SYILERSVIDPSKQELKSETFNLDHVKILRVIEYSRFIQSSENCSKTIV 123
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 0.51
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 488 KELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTK 643
K L + +S ++ LSQ K ++ +TTS D +S+ + D+++ L K
Sbjct: 689 KLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNLKERHNDELDSLNK 740
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 407 LTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTK 544
L N++ +++ + +WV K D E+KE+ + TD L T+
Sbjct: 641 LVNRLDVDSFLHPKTPKWVFNKQDQEVKEIKALTSTVTDSTLVDTQ 686
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 530 LSQTKKSIDDITTSARRSMDDISSKAKS 613
L KKS DDITT +R M+D S +S
Sbjct: 177 LCSPKKSKDDITTPKKRLMEDTYSPRES 204
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -1
Query: 618 SVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELA 496
+++ L I LL +++ S+ CDNN + +LQ +A
Sbjct: 554 NIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIA 594
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.7
Identities = 30/116 (25%), Positives = 46/116 (39%)
Frame = -1
Query: 630 SISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNFPITHSI 451
SISS+V + SS A S+ N SS+L + +S+ +S +N S
Sbjct: 244 SISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSA 303
Query: 450 ACLPLPAFREILLVKRSSM*LLRGTPCTVTTASCFSNVFEESEGCGVYRTVSSTAM 283
+ PL + SS L + TTA+ S+ S + SST +
Sbjct: 304 SSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPL 359
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 299 FHQQQCN-DRMLGLLFLKSSVAVLGLLLISH*HN 201
FH Q N D++L + FL V ++G+L +H HN
Sbjct: 443 FHPPQMNTDQLLLVSFLGLVVNLVGILAFNHGHN 476
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 11 NHPWXTVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTH 133
+HP T A PNP+ P+ + DV + +D ++ H
Sbjct: 165 SHPIPTPAIQRTSSIPNPLTPSYVVFDVAKPVPIDVNIYDH 205
>SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 375
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +2
Query: 254 KTTNLTFCHYIAVDETVRYTPHPSDSSKTLLKQEAVVTVQGVPLSSYMEDLLTNK 418
+TT +T E PHP +S LL PL+ Y+ ++ N+
Sbjct: 77 ETTTVTPTVTATAQELSTLNPHPENSKIVLLMGSNAQNDPSSPLNPYIRTIIKNR 131
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = +2
Query: 101 RKVVDGVLHTHRLVSSKWFFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTN 265
RK+++ +LH+H +SS +F+ + + A + + +NP R + ++N
Sbjct: 42 RKIINEMLHSHSELSS-FFYAEKSNTFLTIAGLAESELFDTLNPAFRISSCPSSN 95
>SPAC21E11.07 ||SPAC2C4.01|glycine cleavage
T-protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 332 SKTLLKQEAVVTVQGVPLSSYMEDLLTNKISLN 430
S L ++++ V+GV +++ L TNKI+L+
Sbjct: 22 SVCLNSSKSLIRVEGVDAVKFLQGLTTNKITLD 54
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = +2
Query: 47 RKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFFPRWAQALIGTAKICYASEISEV 226
RKYP P IGTD + H ++ + RW Q+ +G +++ + ++
Sbjct: 353 RKYP----PHCIGTDKAVPQKFGADFHNENILLGAYISTRWRQSHMGFFG-DHSTLLFQL 407
Query: 227 NPIQRQMTLKTTNLTFCHY 283
PI + + +C +
Sbjct: 408 QPIHQVYYASNLDKNYCMF 426
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 500 SSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 634
+SA S+DE Q + +S++ + + S+ KS L D+EK
Sbjct: 267 TSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSELRDLEK 311
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +1
Query: 214 DIRS--KPNTATDDFKNNKPN 270
D+RS ATDDF +NKPN
Sbjct: 209 DVRSLVAGTPATDDFSHNKPN 229
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,055,344
Number of Sequences: 5004
Number of extensions: 63800
Number of successful extensions: 202
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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