Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E14
(825 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 80 2e-15
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 36 0.030
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 33 0.36
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 33 0.36
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 32 0.48
03_01_0034 + 318432-318825,318902-319851 32 0.64
08_01_0098 - 700443-700660,701112-701268,701586-701678,701763-70... 31 0.84
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 31 1.1
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 31 1.1
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 31 1.1
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 31 1.1
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 31 1.1
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 31 1.1
03_04_0172 + 18017164-18017313,18017389-18017499,18017719-180178... 29 3.4
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 29 4.5
01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567 29 5.9
09_01_0131 - 1966406-1966425,1967469-1967901 28 7.8
07_01_0773 + 5963165-5963306,5963440-5963489,5963580-5963645,596... 28 7.8
04_01_0502 - 6587068-6587964 28 7.8
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 28 7.8
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 80.2 bits (189), Expect = 2e-15
Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 24/243 (9%)
Frame = +1
Query: 133 LQFGHXSNYVGAHFWNXQALSFDYSGTATTD-------LNHDILYREGQTSRNEVTYTPR 291
+Q G +NYVG+HFWN Q + D L+ D+LYR G+T + TY PR
Sbjct: 7 VQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAALDMDVLYRSGETHQGVATYCPR 66
Query: 292 LLIADLKGALKTLPQSGGLSDDAQETD--LQWDTVEKIEEPPPEKNQYLAAI------DS 447
L+ D + + L GG+ ++ V + P +N +L ++ S
Sbjct: 67 LVSVDSR--VYILHVHGGIICRVSWLFEFIRSGNVTRSVSKPHGRNLFLQSLVEEGQNPS 124
Query: 448 VQTTVADGKK--DYN-----LEENVITWTDYLYPRFHSRTVNVVNEYQHGSNKEAFDIYP 606
++ +K +Y LE + WTDY +H +++ + Y ++ + FD Y
Sbjct: 125 TSNGGSNSQKSVEYKDLIECLENGINFWTDYSKVHYHPQSLYEL--YGSWTDFDKFDNYG 182
Query: 607 TGRGVWKSDYGDL--FSDNIRKYVEECDSMQGFQINFDCTDGFAGLALGCIXHLSDEYTK 780
+ + V SD+ + ++ +R +VEECD +QG Q D + GF+ +A + +++D+YT
Sbjct: 183 SAQEV-VSDWSQIEEMNERLRFFVEECDHIQGIQFIVDDSGGFSSVAAQFLENIADDYTN 241
Query: 781 PIL 789
++
Sbjct: 242 TLV 244
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +1
Query: 133 LQFGHXSNYVGAHFWNXQALSFDYSGTATTD-------LNHDILYREGQT 261
+Q G +NYVG+HFWN Q + D L+ D+LYR G+T
Sbjct: 7 VQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNDALDMDVLYRSGET 56
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIXHLSDEYTK 780
DL D IRK + C +QGF + F+ G G LG + LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIXHLSDEYTK 780
DL D IRK + C +QGF + F+ G G LG + LS +Y K
Sbjct: 116 DLCLDRIRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIXHLSDEYTK 780
DL D +RK + C +QGF + F+ G G LG + LS +Y K
Sbjct: 116 DLCLDRVRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGK 163
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Frame = +1
Query: 124 LLXLQFGHXSNYVGAHFWNXQALSFDYSGTATTDLNHDILYREGQTSRNEVT---YTPRL 294
+L +Q G N +GA FW T D + D+ NE + + PR
Sbjct: 4 ILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFVPRA 63
Query: 295 LIADLKGALKTLPQSG 342
++ DL+ +SG
Sbjct: 64 VLMDLEPGTMDSVRSG 79
Score = 31.5 bits (68), Expect = 0.84
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>08_01_0098 -
700443-700660,701112-701268,701586-701678,701763-702149,
702755-702829,703486-703609,703693-703832,703904-703993,
704254-704298,704917-705042,705138-705272,705966-706451,
706539-706596,706728-706855,707209-707463
Length = 838
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/68 (22%), Positives = 34/68 (50%)
Frame = +1
Query: 427 YLAAIDSVQTTVADGKKDYNLEENVITWTDYLYPRFHSRTVNVVNEYQHGSNKEAFDIYP 606
YL +DS++ +ADG + + + T++L P+ + + +++ Y + +
Sbjct: 416 YLTRVDSLRRRMADGLDFQLIRQTFMDATEFLSPQMGTEDLLLLHAYWAKLERTLGNDLA 475
Query: 607 TGRGVWKS 630
RGVW++
Sbjct: 476 AARGVWEN 483
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +1
Query: 124 LLXLQFGHXSNYVGAHFWN--XQALSFD----YSGTATTDLNH-DILYREGQTSRNEVTY 282
+L +Q G N +GA FW D YSG + L ++ Y E R Y
Sbjct: 4 ILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGR----Y 59
Query: 283 TPRLLIADLKGALKTLPQSG 342
PR ++ DL+ +SG
Sbjct: 60 VPRAVLMDLEPGTMDSVRSG 79
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 294 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 352
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 124 LLXLQFGHXSNYVGAHFWNXQALSFDYSGTATTDLNHDILYREGQTSRNEVT---YTPRL 294
+L +Q G N +GA FW T + D+ NE + Y PR
Sbjct: 4 ILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRA 63
Query: 295 LIADLKGALKTLPQSG 342
++ DL+ +SG
Sbjct: 64 VLMDLEPGTMDSVRSG 79
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGFAGLALG--CIXHLSDEY-TKPILAYPIIAS 810
DL D +RK + C +QGF + F+ G G LG + LS +Y K L + I S
Sbjct: 176 DLCLDRLRKLADNCTGLQGFLV-FNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPS 234
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 DLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEY-TKPILAYPIIAS 810
D D +RK E CD +QGFQ+ G +G+ I + +EY + +L + + S
Sbjct: 114 DSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPS 172
>03_04_0172 +
18017164-18017313,18017389-18017499,18017719-18017886,
18017985-18018098,18019070-18019126,18019797-18020475,
18021016-18021174,18021449-18021618
Length = 535
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 307 LKGALKTLPQSGGLSDDAQETDLQWDTVEKIEEPPPEKNQ 426
L+G+ +TLP G++ ++ + DTVE P +K Q
Sbjct: 385 LEGSKRTLPIDDGMNPHLSLSETEQDTVEAASSPKDKKGQ 424
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 259 TSRNEVTYTPR-LLIADLKGALKTLPQSGGLSDDAQETDLQWDTVEKIEEPPPEKNQYLA 435
T E + P L+ D K + T +S TD++ ++E E+ ++LA
Sbjct: 464 TDELEARFFPHHKLLRDCKSSSATQQESSMAVKKDCNTDMELSSLEPQEDENSIAMEFLA 523
Query: 436 AIDSVQTTVADGKKDYNLEENVI 504
++D ++ ++ NLE+ +I
Sbjct: 524 SLDGEESGFFKNRRAKNLEKTII 546
>01_06_0243 + 27833497-27834042,27834144-27834238,27834400-27835567
Length = 602
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +1
Query: 223 DLNHDILYREGQTSRNEVTYTPRLLIADLKGALKTLPQSGGLSDDAQETDLQWDTVEKIE 402
D +HD+L G +R+E Y R +G LP+ GGL + QE +
Sbjct: 22 DGSHDVLDIFG--TRSESDYY-RNAFQGKQGQAVPLPRGGGLRREQQELGAAGPGGSGLS 78
Query: 403 EPPPEKNQYLAAIDSVQTTV 462
+ PP A+DS++ V
Sbjct: 79 KAPPRSAPSKVALDSLKLPV 98
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 382 DTVEKIEEPPPEKNQYLAAIDSVQTTVADGKKDYNLEENV-ITWTD 516
DT ++ PP ++ A D + DG+++ L+ V +TW D
Sbjct: 53 DTPPPVQAPPAPEHNCAGAFDGIAVVAGDGREE-RLDGGVFLTWED 97
>07_01_0773 +
5963165-5963306,5963440-5963489,5963580-5963645,
5964162-5964188,5965320-5965375,5966613-5966681,
5966901-5966995,5967141-5967251,5970545-5970879,
5971218-5971253,5971254-5971421
Length = 384
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 328 LPQSGGLSDDAQETDLQWDTVEKIEEPPPEKNQYLAAIDSVQTTVADGKKDYNLEENVIT 507
+PQ G SD+ QE + D E+ P +S TT G++ ++ + ++
Sbjct: 151 IPQLDGSSDENQEVPQEDDGAMPTEKEPSVSFMSRTGKNSHATTDKTGRESFSRSDIIVG 210
Query: 508 W 510
W
Sbjct: 211 W 211
>04_01_0502 - 6587068-6587964
Length = 298
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 307 LKGALKTLPQSGGLSDDAQETDLQWDTVEKIEEPPPEKNQYLAAIDSVQTTVADG-KKDY 483
L+ ++ + + + ++ + + VEK+ EPP +N+ + D DG +DY
Sbjct: 27 LEASVSKIEEPSTIESQSEPSTSTYSIVEKVPEPPAVENEEIQTPDHAAIMFRDGFDEDY 86
Query: 484 NLEENVITWTDYLYP 528
N + L P
Sbjct: 87 GNTLNYFSKKKPLVP 101
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +1
Query: 124 LLXLQFGHXSNYVGAHFWNXQALSFDYSGTATTDLNHDILYREGQTSRNEVT---YTPRL 294
+L +Q G N +GA FW T N D+ NE + + PR
Sbjct: 4 ILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRA 63
Query: 295 LIADLK 312
++ DL+
Sbjct: 64 VLMDLE 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,225,147
Number of Sequences: 37544
Number of extensions: 397674
Number of successful extensions: 946
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -