Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E14
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 33 0.25
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 33 0.25
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 30 1.7
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical pr... 29 5.3
U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical pr... 29 5.3
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 29 5.3
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 29 5.3
AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical ... 29 5.3
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 28 9.3
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 28 9.3
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 28 9.3
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 28 9.3
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 583 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI--NFDCTDGFAGLALGCIX 756
++A + Y GR + D+ D +++ E C+ +QGF I +F G L+L +
Sbjct: 103 EDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSL-LME 161
Query: 757 HLSDEY-TKPILAYPI 801
LS EY KP L + I
Sbjct: 162 RLSTEYGKKPKLEFAI 177
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.25
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 583 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQI--NFDCTDGFAGLALGCIX 756
++A + Y GR + D+ D +++ E C+ +QGF I +F G L+L +
Sbjct: 75 EDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSL-LME 133
Query: 757 HLSDEY-TKPILAYPI 801
LS EY KP L + I
Sbjct: 134 RLSTEYGKKPKLEFAI 149
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPILA 792
D IRK E CD +QGFQ+ G +G+ I + +EY I++
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPILA 792
D +RK E CD +QGFQ+ G +G+ I + +EY I++
Sbjct: 118 DVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMS 165
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPIL 789
D +RK E CD +QGFQ+ G +G+ I + +EY I+
Sbjct: 118 DVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPILA 792
D IRK E CD +QGFQ+ G +G+ I + +E+ I++
Sbjct: 118 DVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMS 165
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 583 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXH 759
++A + Y G + D+ D +R+ E C S+QGF I G +G +
Sbjct: 97 EDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMER 156
Query: 760 LSDEYTK 780
LS +Y K
Sbjct: 157 LSIDYGK 163
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 583 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXH 759
++A + Y G + D+ D IRK E C+ +QGF + G +G + +
Sbjct: 100 EDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMER 159
Query: 760 LSDEYTK 780
LS E+ K
Sbjct: 160 LSVEFGK 166
>Z77661-3|CAB01187.2| 264|Caenorhabditis elegans Hypothetical
protein F40G12.4 protein.
Length = 264
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 12/67 (17%)
Frame = +1
Query: 304 DLKGALKTLPQSGGLSD----------DAQETDLQWDTVEKIEEPPPEKN--QYLAAIDS 447
+L AL +P GG SD DAQ+T ++W+ +++E P KN Q +A
Sbjct: 98 ELVDALSFIPAHGGCSDTYYRLNAQRCDAQKTMMEWEIEKQLERLPKFKNSTQVIAMCRE 157
Query: 448 VQTTVAD 468
++ + D
Sbjct: 158 IKECMED 164
>U64851-2|AAC47987.1| 613|Caenorhabditis elegans Hypothetical
protein F28A12.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 603 IDVKSFLITSVLILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISYCCLNRINSSEI 427
I + +FL+ ++ILI Y +S ++I I V F S++ C LN + +S I
Sbjct: 67 ISILAFLVYQIVILIQYFYSKPTLSQINFITNEG-----AVYFPSVTVCNLNPVKTSFI 120
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 583 KEAFDIYPTGRGVWKSDYGDLFSDNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXH 759
++A + Y G + D+ D +R+ VE C +QGF + G +G +
Sbjct: 102 EDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMER 161
Query: 760 LSDEYTK 780
LS +Y K
Sbjct: 162 LSVDYGK 168
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 553 VVNEYQHGSNKEAFDIYPTGRGVWKSDYGDLFSDNIRKYV 672
VV +Y E+FDIYP+G + K D F + YV
Sbjct: 2 VVEKYLEDEELESFDIYPSGWTICKDILHDSFHRLLYFYV 41
>AC006605-2|AAL00853.1| 139|Caenorhabditis elegans Hypothetical
protein C07H6.9 protein.
Length = 139
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = -1
Query: 627 FPYSSTSGIDVKSFLITSVLILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISYCCLN 448
F Y S I F +TS+LI+IY+I + ++ R+ VI + + K+V+ +S + +
Sbjct: 28 FVYLSLVYIQFSLFFLTSILIVIYFISYNGVQ-RLNVITITTNFI-KMVVDVS-CFGTIY 84
Query: 447 RINSSEIL 424
+ SS+IL
Sbjct: 85 FVGSSKIL 92
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPIL 789
D +RK E D +QGFQ+ G +G+ I + +EY I+
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 328 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 230
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 328 EFLKPLSNQLSVIWVCKLLHSSTFDPLGIKYRD 230
EF + S Q + +VC+L H D LG++Y+D
Sbjct: 44 EFPRTQSAQTILDYVCQLKHIQEKDFLGLRYQD 76
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 652 DNIRKYVEECDSMQGFQINFDCTDGF-AGLALGCIXHLSDEYTKPIL 789
D +RK E D +QGFQ+ G +G+ I + +EY I+
Sbjct: 118 DVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -2
Query: 377 CKSVSCASSERPPLCGRVFKAPF---KSAISN 291
CK V S E+ P CG + ++PF K A++N
Sbjct: 198 CKLVQDLSREQQPPCGLILESPFNNLKDAVTN 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,254,902
Number of Sequences: 27780
Number of extensions: 384529
Number of successful extensions: 1115
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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