Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E14
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    29   0.039
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   4.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.0  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 0.039
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 66  SHTXHCRCISFHLQMSTRASPXL-TVWSLFKLCWCPF 173
           +++ H + + FHL    +AS  L  + S F +CW PF
Sbjct: 352 TNSPHQKKLRFHLAKERKASTTLGIIMSAFIVCWLPF 388


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 427 YLAAIDSVQTTVADGKKDYNLEENVITWTDYLY 525
           +L+ I+ V T++A      NL EN I W DY +
Sbjct: 537 FLSDINGVFTSIASLLL-LNLSENHIEWFDYAF 568


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 709 FDCTDGFAGLALGCI 753
           FD  DG  GLALG I
Sbjct: 242 FDLMDGILGLALGPI 256


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 570 LILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISY 460
           L +I++IH    +    +   + Y++   VIF++I+Y
Sbjct: 122 LPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINY 158


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 570 LILIYYIHSSRMKTRIQVICPSDYILFKIVIFLSISY 460
           L +I++IH    +    +   + Y++   VIF++I+Y
Sbjct: 122 LPVIFWIHGGAFQFGSGIPMGAKYLMDSDVIFVTINY 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,415
Number of Sequences: 438
Number of extensions: 4704
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)