Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E12
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81064-4|CAB02965.1| 394|Caenorhabditis elegans Hypothetical pr... 30 0.98
AF039716-6|AAY55880.1| 215|Caenorhabditis elegans Hypothetical ... 28 3.9
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 27 6.9
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 27 6.9
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.9
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 27 6.9
AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical ... 27 6.9
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical ... 27 9.1
AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81064-4|CAB02965.1| 394|Caenorhabditis elegans Hypothetical
protein F16B12.5 protein.
Length = 394
Score = 29.9 bits (64), Expect = 0.98
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 152 VSQLAELDHELSKISLHYKHAPPKAVF 232
V QL LD +SK + KH PPKA F
Sbjct: 356 VKQLFVLDKAMSKALKNKKHVPPKATF 382
>AF039716-6|AAY55880.1| 215|Caenorhabditis elegans Hypothetical
protein W03G9.9 protein.
Length = 215
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 59 YSPALSPTHRQHTHHLAKSDVEASEVHKSRHVSQLAELDHELSKI 193
YS ALS + A++ + AS + RHV L LD + ++
Sbjct: 2 YSSALSSGDLRDCRRYARAVISASFIASLRHVQTLKNLDQSVEQV 46
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 164 AELDHELSKISLHYKHAPPKAVFIQHSAEEHDLLSSDTD 280
A+ DH + L KH+P +FI + DLLS D D
Sbjct: 352 ADFDHYQKALKLLLKHSPEAKIFI--FLTKTDLLSVDED 388
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 47 SPLEYSPAL-SPTHRQHTHHLAKSDVEASEVHKSRHVSQ---LAELDHELSKISLHYKHA 214
+P SP +P H H HH V +S + RH SQ LA+ ++ +++Y+
Sbjct: 365 NPYWQSPVTQAPHHNSHHHHHHHPRVSSSSDPQQRHQSQQHYLAQTVSNPNRQNVNYQRY 424
Query: 215 P 217
P
Sbjct: 425 P 425
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 71 LSPTHRQHTHHLAKSDVEASEVHKSRH 151
+SP H HTHH + EVH H
Sbjct: 74 ISPHHGHHTHHAHGAHPGHHEVHHHHH 100
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 47 SPLEYSPAL-SPTHRQHTHHLAKSDVEASEVHKSRHVSQ---LAELDHELSKISLHYKHA 214
+P SP +P H H HH V +S + RH SQ LA+ ++ +++Y+
Sbjct: 365 NPYWQSPVTQAPHHNSHHHHHHHPRVSSSSDPQQRHQSQQHYLAQTVSNPNRQNVNYQRY 424
Query: 215 P 217
P
Sbjct: 425 P 425
>AC006637-1|AAK85476.2| 342|Caenorhabditis elegans Hypothetical
protein F41B4.1 protein.
Length = 342
Score = 27.1 bits (57), Expect = 6.9
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 14 SISNSGPVS-PGSPLEYSPALSPTHRQHTHHLAKSDVEASEVHKSRHVSQLAELDHELSK 190
SI N+G +S PGS + A+S + Q+ A S + + H H L H++ +
Sbjct: 152 SIGNTGMISQPGSRV--GSAMSAPYSQNQS--ANSTL-TRQSHSQSHT-----LPHQMPQ 201
Query: 191 ISLHYKHAPPKAVFIQHSAEEHDLLSSDTDT 283
+++HA P A QH + + T T
Sbjct: 202 YQQYHRHATPPAPAPQHQNNTNYYTENTTST 232
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 145 PPRVAASGAGPRAQQDQPPLQARAAQGRVHTTQRR 249
PP + AS + + Q P Q R +G TQRR
Sbjct: 109 PPTIGASTHSNQNSRQQEPSQNRRRRGGQQNTQRR 143
>AL024499-2|CAB54260.2| 242|Caenorhabditis elegans Hypothetical
protein H38K22.2b protein.
Length = 242
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 30 VRCLPALRSSTVQRCRQRIDS 92
V+ + AL++ TVQ RQRIDS
Sbjct: 73 VKGMTALQADTVQNLRQRIDS 93
>AL024499-1|CAB54261.2| 295|Caenorhabditis elegans Hypothetical
protein H38K22.2a protein.
Length = 295
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 30 VRCLPALRSSTVQRCRQRIDS 92
V+ + AL++ TVQ RQRIDS
Sbjct: 126 VKGMTALQADTVQNLRQRIDS 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,755,299
Number of Sequences: 27780
Number of extensions: 119980
Number of successful extensions: 677
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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