Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E09
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 365 e-102
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 108 7e-25
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 97 2e-21
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 97 2e-21
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 95 9e-21
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 91 2e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 90 4e-19
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 85 1e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 81 2e-16
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 78 2e-15
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 78 2e-15
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 73 4e-14
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 68 2e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 68 2e-12
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 66 5e-12
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 63 5e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 61 2e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 40 5e-04
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 40 5e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 39 9e-04
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.008
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.057
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.70
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.6
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.6
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 27 2.8
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 27 2.8
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 26 5.0
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 6.6
SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 6.6
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 8.7
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 8.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.7
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 8.7
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 8.7
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 365 bits (898), Expect = e-102
Identities = 166/208 (79%), Positives = 183/208 (87%)
Frame = +1
Query: 115 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 294
++PTFK VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDT
Sbjct: 6 NVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 295 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDI 474
AGQEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W RDLVRVCE IPIVLCGNKVD+
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDV 125
Query: 475 KDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPE 654
K+RKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL PPE
Sbjct: 126 KERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPE 185
Query: 655 VTMDPQWQNQIEKDLQDAQNTALPEEDE 738
V +D Q Q ++++ +A LP+ED+
Sbjct: 186 VQVDQQLLAQYQQEMNEAAAMPLPDEDD 213
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 108 bits (260), Expect = 7e-25
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Frame = +1
Query: 127 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 306
FK +L+GD G GK+ + R + + Y++T+GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 483
+F + YY II++DVT + ++ NV W +++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 484 KVKAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 600
KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 97.5 bits (232), Expect = 2e-21
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Frame = +1
Query: 127 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 306
FK V +G+ GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD 480
+F L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLAD 130
Query: 481 RKVKAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIGDGNLE 621
++ + + K L+ + + SAK+ +N + F +A+ L G N+E
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 97.1 bits (231), Expect = 2e-21
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 6/163 (3%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 303
K VL+GD GK++ V R + +F+ +T+G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 304 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-K 477
E++ L YY CAI+++D+T + + +W ++L R EGI I L GNK+D+ +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 478 DRKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 600
+R+ KA + + NL +++ SAK+ N + F +A+KL
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 95.1 bits (226), Expect = 9e-21
Identities = 50/190 (26%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K +++G+ G GKT+ + +++ +F K Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRD-LVRVC----EGIPIVLCGNKVDI 474
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 475 KDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPAL 642
+++K K+K + F + + Y++ SAK N ++ F +A+ + + + + +A
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFT 189
Query: 643 LPPEVTMDPQ 672
P + M+ Q
Sbjct: 190 DPIHLDMESQ 199
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 90.6 bits (215), Expect = 2e-19
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +1
Query: 127 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 306
FK VL+GD G GK+ + R EF + +T+GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIKD- 480
++ + YY A+I++D+T + ++ NV W ++L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 481 RKVKAKTI-VFHRKKNLQYYDISAKSNYNFEKPF 579
R V + F + NL + + SA N E+ F
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 89.8 bits (213), Expect = 4e-19
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 3/160 (1%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K +L+GD G GK+ + R F ++ T+G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKD-R 483
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 484 KVK-AKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 600
+V + + +++ + SAK+N N ++ F LAR++
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 85.0 bits (201), Expect = 1e-17
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +1
Query: 118 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 297
MPT KCV+VGDG GKT + + T +F YV T+ + + + P ++DTA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTA 59
Query: 298 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 474
GQE + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDL 119
Query: 475 KD 480
+D
Sbjct: 120 RD 121
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 80.6 bits (190), Expect = 2e-16
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K V++GD G GKT + + + +F ++Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE----GIPIVLCGNKVDIK 477
F L +Y C +I+++V + ++ +V NW ++ + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 478 DRKVKA----KTIVFHRKK---NLQYYDISAKSNYNFEKPFLWLAR 594
D +A + + + + K N+ +++ SAK N N F ++R
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 77.8 bits (183), Expect = 2e-15
Identities = 46/166 (27%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTA 297
K VL G GTGK+ ++R + +++ + T+G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 298 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEG-IPIVLCGNKVDI 474
GQEKF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 475 KD-RKVKAKTIV-FHRKKNL-QYYDISAKSNYNFEKPFLWLARKLI 603
++ R+V + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 77.8 bits (183), Expect = 2e-15
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Frame = +1
Query: 127 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 306
+K V+VGDGG GK+ + + F +Y T+ G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKD 480
++ +R+ Y G+ ++++++TSR ++ + +++ ++RV + P+VL NK D++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 481 RKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 600
+V +A+ + + Y + SAK N E+ F L R +
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 72.9 bits (171), Expect = 4e-14
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 306
K V+VGDGG GKT + +G F ++YV T+ + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI-KD 480
++ LR Y ++ F + + NV W+ ++ C PIVL G K D+ KD
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 481 R 483
R
Sbjct: 136 R 136
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 2e-12
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K V+VGDG GKT + G F + YV T+ E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 480
+ LR Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 67.7 bits (158), Expect = 2e-12
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K V+VGDG GKT+ + G F +YV T+ E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKDRK 486
+ LR Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 487 V 489
V
Sbjct: 129 V 129
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 66.1 bits (154), Expect = 5e-12
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 306
K V++GDG GKT+ + G F + Y T+ +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 307 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK-- 477
++ LR Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 478 -DRKVKAKTIVFH-------RKKN-LQYYDISAKSNYNFEKPFLWLAR 594
+ +V I+ + +K N ++Y + SAK N + F AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 62.9 bits (146), Expect = 5e-11
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K V+VGDG GKT + G F + YV T+ E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 480
+ LR Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.9 bits (141), Expect = 2e-10
Identities = 30/116 (25%), Positives = 52/116 (44%)
Frame = +1
Query: 124 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 303
T K ++GD GKT+ + ++ G F+++ TLGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 304 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 471
+F + + MFD++ + T ++ W+R + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 39.5 bits (88), Expect = 5e-04
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
+ ++G GK++ +++ F + Y T+ + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVR--VCEGIPIVLCGNKVDI-KD 480
+ L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 481 RKVKAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 579
R V A+ + + + SA+ N N + F
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 39.5 bits (88), Expect = 5e-04
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
+ +L+G GKTT +K L E + T G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEGI---PIVLCGNKVDI-- 474
Y+ + I + D + + N ++L+ V E + I++ NK D+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVSG 131
Query: 475 ---KDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 600
+ K I ++ + + + +SA + N + WLA L
Sbjct: 132 ALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 38.7 bits (86), Expect = 9e-04
Identities = 28/100 (28%), Positives = 44/100 (44%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 310 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLVRV 429
L Y+ Q I + D R + + H +L R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.008
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 306
K +L+G G+GK++ ++ + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 307 KF-----GGLRDGYYIQGQCAIIMFDVTSR 381
F RD + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 32.7 bits (71), Expect = 0.057
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
+ +++G GKTT + + + + T+G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 310 FGGLRDGYYIQGQCAIIMFD 369
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.70
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 136 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLVFHTN 261
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 136 VLVGDGGTGKTTFVK 180
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 375 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 220
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 27.1 bits (57), Expect = 2.8
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +1
Query: 130 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 309
K + +G GKTT + H+ + +A + +HP G +RF +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 310 FGGLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 471
L Y+ + + + D R++ + +P ++ GNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 625 VAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDE 738
+++P PP D + +E+D++D AL EDE
Sbjct: 29 LSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDE 66
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 655 VTMDPQWQNQIEKDLQDAQNTALPEED 735
VT + N+I K ++D +NT LP+ D
Sbjct: 112 VTEINEISNKIPKSIEDLENTLLPQAD 138
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 457 GNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 585
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPAC19D5.03 |cid1||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 370 VTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAK 498
++ +Y+ VPN H++ + C + N++ I D++ K K
Sbjct: 28 ISKSCSYQKVPNSHKEFTKFCYEV-----YNEIKISDKEFKEK 65
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 435 FTYTDQISMPVRYIF-VRNSRGYVEHDDSTLSLNIVSVSKTTKLLLSGCV 289
+ YTD + +F V + +EH+ + L ++ SK +L+ CV
Sbjct: 177 YFYTDASPLKTPLVFPVPENNKEIEHEVVSEILELIEKSKNPSILVDACV 226
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 325 DGYYIQGQCAIIMFDVTSRVTYKNVP 402
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 8.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 523 NLQYYDISAKSNYNFEKPFLWL 588
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 133 CVLVGDGGTGKTTFVK 180
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 LERVKSRFSYTIXXXXXXXXXXMADDMPT-FKCVLVGDGGTGKTTFVK 180
+E S SYT + D+P + +LVG G GK+T +K
Sbjct: 1 MEVTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLK 48
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 403 NWHRDLVRVC-EGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPF 579
+WH + +V +G V G D+ ++ +K +KK L +I AK E+
Sbjct: 977 HWHVEAGKVTGKGKTAVDDGKFEDLSEKDLKKIEAKATKKKKLTRNEIKAKERRAREREL 1036
Query: 580 LWL 588
WL
Sbjct: 1037 AWL 1039
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,312,552
Number of Sequences: 5004
Number of extensions: 72894
Number of successful extensions: 309
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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