Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E05
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 253 8e-68
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 252 1e-67
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 248 2e-66
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 212 2e-55
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 196 9e-51
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 168 4e-42
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 167 5e-42
01_06_0416 - 29195666-29196946 31 0.58
08_01_0017 + 132109-132924 31 1.0
05_07_0068 - 27469929-27471050 29 2.3
04_04_1659 - 35127145-35127204,35127324-35127464,35127597-351276... 29 3.1
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386... 29 3.1
03_06_0416 - 33780911-33781861 29 4.1
04_03_0833 + 20147242-20147849,20147937-20148081,20148157-201482... 28 5.4
06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-19... 28 7.1
03_06_0615 + 35118336-35120402 27 9.4
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 27 9.4
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 253 bits (620), Expect = 8e-68
Identities = 116/199 (58%), Positives = 149/199 (74%)
Frame = +2
Query: 38 SGLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 217
SG L+ P NKG+AF+ R + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 218 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 397
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149
Query: 398 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 577
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPITI
Sbjct: 150 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 209
Query: 578 DVGTNTXSMLDDPLYIGLR 634
DVGTN S+L+D YIGL+
Sbjct: 210 DVGTNNESLLNDEFYIGLK 228
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 252 bits (618), Expect = 1e-67
Identities = 114/199 (57%), Positives = 152/199 (76%)
Frame = +2
Query: 38 SGLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 217
SG L+ P NKG+AF+ + R + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 218 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 397
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218
Query: 398 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 577
DVL+NWPE +++ IVVTDGERILGLGDLG GMGIPVGKL+LYTALGG++P CLPITI
Sbjct: 219 LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITI 278
Query: 578 DVGTNTXSMLDDPLYIGLR 634
DVGTN +L+D YIGLR
Sbjct: 279 DVGTNNEQLLNDEFYIGLR 297
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 248 bits (608), Expect = 2e-66
Identities = 113/199 (56%), Positives = 150/199 (75%)
Frame = +2
Query: 38 SGLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 217
SG L+ P NKG++FT + R + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 218 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 397
LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152
Query: 398 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKPHQCLPITI 577
++L+NWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P CLPITI
Sbjct: 153 LELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITI 212
Query: 578 DVGTNTXSMLDDPLYIGLR 634
DVGTN +L D YIGLR
Sbjct: 213 DVGTNNEDLLKDEFYIGLR 231
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 212 bits (517), Expect = 2e-55
Identities = 96/172 (55%), Positives = 128/172 (74%)
Frame = +2
Query: 38 SGLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 217
SG + L+ P NKG+AF R+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 218 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 397
+M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172
Query: 398 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKP 553
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKLALYTALGG++P
Sbjct: 173 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRP 224
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 196 bits (479), Expect = 9e-51
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
Frame = +2
Query: 41 GLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 199
G D L P NK AF + R LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 200 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 370
L K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
Query: 371 ITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 550
+ DKG + ++ NWP V IVVTDG RILGLGDLG G+GIP+GKL +Y A GI
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKLDVYVAAAGIN 225
Query: 551 PHQCLPITIDVGTNTXSMLDDPLYIGLR 634
P + LPI +DVGTN +L+D LY+GLR
Sbjct: 226 PQKVLPIMLDVGTNNTKLLEDKLYLGLR 253
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 168 bits (408), Expect = 4e-42
Identities = 78/147 (53%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Frame = +2
Query: 200 PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFI 373
PL K+ L L DRNE ++Y+ + DN+ E PIVYTPTVGL CQ + ++RRPRG++
Sbjct: 144 PLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPIVYTPTVGLVCQNYSGLFRRPRGMYF 203
Query: 374 TIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIKP 553
+ D+G + ++ NWP V IVVTDG RILGLGDLG G+GI +GKL LY A GI P
Sbjct: 204 SAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGVHGIGIAIGKLDLYVAAAGINP 263
Query: 554 HQCLPITIDVGTNTXSMLDDPLYIGLR 634
+ LP+ IDVGTN +L DPLY+GL+
Sbjct: 264 QRVLPVMIDVGTNNEKLLKDPLYLGLQ 290
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 41 GLDHLKHPGLNKGMAFTIEXRQLLGIHGLLPPRVKTQEEQVE 166
G D L P N+G F++ R LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 167 bits (407), Expect = 5e-42
Identities = 70/105 (66%), Positives = 91/105 (86%)
Frame = +2
Query: 236 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 415
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 416 WPETDVRAIVVTDGERILGLGDLGACGMGIPVGKLALYTALGGIK 550
WPE ++ IV+TDGERILGLGDLG GMGIPVGKL+LYTALGG++
Sbjct: 65 WPERSIQVIVITDGERILGLGDLGCQGMGIPVGKLSLYTALGGVR 109
>01_06_0416 - 29195666-29196946
Length = 426
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 108 SWASMGCYHHELRRKRSRLNYASSRSTDTKIHLTSTSILWGSW 236
SW + G ELR + + S +TD +++LT S W SW
Sbjct: 204 SWTACGPMPAELRESAAA-TWLSVAATDQRVYLTDRSTGWASW 245
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1
Query: 213 YLLSGFSYLSIESLHSSTCSSC 148
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>05_07_0068 - 27469929-27471050
Length = 373
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 222 R*MYLLSGFSYLSIESLHSSTCSSCVLTRGGNNPWMPKS*RXSMVNAIPLLRPGCLRWSR 43
R + L++ ++ L + S+ SS S T GG N W+ + + PLL G L R
Sbjct: 8 RMLLLMANYAALLVGSVASSLLSRFYFTHGGRNRWVVTLVQSA---GFPLLVAGALAGGR 64
Query: 42 P 40
P
Sbjct: 65 P 65
>04_04_1659 -
35127145-35127204,35127324-35127464,35127597-35127647,
35127757-35127837,35128229-35128324,35128393-35128568,
35130088-35130176,35130255-35130362,35130673-35130809,
35131023-35131073,35131264-35131310,35131477-35131544,
35132161-35132262,35132556-35132735,35132821-35133059
Length = 541
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 496 PARAQIAQAQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRDEEA 362
P+ A A S G G V P ++N++Y L+ R+EEA
Sbjct: 15 PSPRAAAAAAGLGSGGGGGGGSVHGSPDIRNVIYERLVAIRNEEA 59
>03_02_0792 +
11236785-11237337,11237711-11238261,11238446-11238628,
11238768-11238966,11239055-11239761
Length = 730
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -3
Query: 541 SERGVEREFAHRDAHPARAQIAQAQNTFSVGYNNGADVRLRPVLKNIVYMSLIVD-RDEE 365
++ G + F+ DA+ + A+ S G +V R V +VY+S R+
Sbjct: 103 NDDGEVQVFSLADAYGGDGLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERR 162
Query: 364 APWSAVHKPELLTGQANR 311
+PW+ +K L TG+ R
Sbjct: 163 SPWNVAYKTNLRTGETER 180
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 368 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 225
R P GGT +R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>04_03_0833 +
20147242-20147849,20147937-20148081,20148157-20148210,
20148297-20148388,20148957-20149093,20149210-20149464,
20149598-20149771,20149863-20149960
Length = 520
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 511 GQTRALHRARRHQASSVSAHHYRRG 585
GQ H A R +A++ +AHH +RG
Sbjct: 2 GQEEGNHSAERGKAAAAAAHHSKRG 26
>06_01_0018 + 194295-194640,194679-194917,195737-195885,196248-196342,
196685-196780,197248-197399,198683-198823,199068-199319,
199463-199603,199686-200003,200146-200232,201025-202006,
202091-202179,202968-203072,203155-204306,204844-205359,
205455-205650,206299-207182
Length = 1979
Score = 27.9 bits (59), Expect = 7.1
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Frame = -3
Query: 535 RGVEREFAHRDAHPAR-AQIAQAQNTFSVGYNNGADVRLRPVLKNIVYMSLIVDRD---- 371
R ++++F+ R + ++ +Q NT S Y +LR +I + +D D
Sbjct: 1106 RILKKKFSRRASETSKQSQSTPVNNTSS--YKQQTSPKLRSD-GSICHQVTTIDGDLENV 1162
Query: 370 --EEAPWSAVHKPELLTGQANRRSVHNWHHFSHVIRDETVEQM 248
EEAP + + E++ Q SV H HV+RDE +E++
Sbjct: 1163 SHEEAPHDILTE-EMILEQKELISVLETHREEHVLRDELLERI 1204
>03_06_0615 + 35118336-35120402
Length = 688
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 424 LRPVLKNIVYMSLIVDRDE-EAPWSAVHKPELLTGQANR 311
L P +VY+S V E + W+AV+ EL TG+ R
Sbjct: 139 LTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRR 177
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 512 GKLALYTALGGIKPHQCLPITIDVGTNTXSMLD 610
GK + + GG+KP Q +PI D N LD
Sbjct: 241 GKCVMGSLFGGVKPKQDIPILADKYLNKELELD 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,107,744
Number of Sequences: 37544
Number of extensions: 484638
Number of successful extensions: 1365
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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