Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E05
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.1  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/44 (31%), Positives = 15/44 (34%)
 Frame = +1

Query: 370 HHDPR*GTCIRCS*ELAGDGRPRHCCNRRRTYSGPGRFGRVRDG 501
           HHD   G  +       G G    C N  RT    G  G   DG
Sbjct: 501 HHDLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSDG 544



 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = +1

Query: 502 HPCG--QTRALHRARRHQASSVSAHHYRRGYEHPXDAG 609
           HP    Q    H + +HQ  +   HH+   ++H    G
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = +1

Query: 502 HPCG--QTRALHRARRHQASSVSAHHYRRGYEHPXDAG 609
           HP    Q    H + +HQ  +   HH+   ++H    G
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = +1

Query: 502 HPCG--QTRALHRARRHQASSVSAHHYRRGYEHPXDAG 609
           HP    Q    H + +HQ  +   HH+   ++H    G
Sbjct: 211 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHGGGVG 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,333
Number of Sequences: 2352
Number of extensions: 17142
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)