Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E04
         (832 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457166-1|CAG33447.1|   87|Homo sapiens MGC:13379 protein.            66   2e-10
BC011010-1|AAH11010.1|   87|Homo sapiens HSPC244 protein.              66   2e-10
BC008671-1|AAH08671.2|  160|Homo sapiens transmembrane protein 8...    63   1e-09
BC047439-1|AAH47439.1|  198|Homo sapiens transmembrane protein 1...    39   0.019
AC107083-1|AAY24048.1|  106|Homo sapiens unknown protein.              37   0.078
DQ496107-1|ABF47096.1|  555|Homo sapiens feline leukemia virus s...    33   1.7  
BC048312-1|AAH48312.1|  555|Homo sapiens feline leukemia virus s...    33   1.7  
AK001419-1|BAA91679.1|  279|Homo sapiens protein ( Homo sapiens ...    33   1.7  
AF118637-1|AAD45243.1|  555|Homo sapiens feline leukemia virus s...    33   1.7  

>CR457166-1|CAG33447.1|   87|Homo sapiens MGC:13379 protein.
          Length = 87

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 28/57 (49%), Positives = 42/57 (73%)
 Frame = +2

Query: 278 VEMIRIFLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVML 448
           +E+IR+F G +GNL  +K+P+ +SV LT PSA+   Y+L+ QTY+LRLE I   ++L
Sbjct: 8   IEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILL 64


>BC011010-1|AAH11010.1|   87|Homo sapiens HSPC244 protein.
          Length = 87

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 28/57 (49%), Positives = 42/57 (73%)
 Frame = +2

Query: 278 VEMIRIFLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVML 448
           +E+IR+F G +GNL  +K+P+ +SV LT PSA+   Y+L+ QTY+LRLE I   ++L
Sbjct: 8   IEVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMNGILL 64


>BC008671-1|AAH08671.2|  160|Homo sapiens transmembrane protein 80
           protein.
          Length = 160

 Score = 63.3 bits (147), Expect = 1e-09
 Identities = 32/114 (28%), Positives = 62/114 (54%)
 Frame = +2

Query: 107 TNVNSSLAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEM 286
           + V SS+  ++L YL+  Y  ++ +  + M   K+   SYP   L+ +  +   +  +E 
Sbjct: 28  STVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEA 87

Query: 287 IRIFLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVML 448
           +R++LG RGNL   + P+  S+ LT  +A+   +FL++Q  +L  ++   A +L
Sbjct: 88  VRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADWALSATLL 141


>BC047439-1|AAH47439.1|  198|Homo sapiens transmembrane protein 17
           protein.
          Length = 198

 Score = 39.1 bits (87), Expect = 0.019
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
 Frame = +2

Query: 119 SSLAYEILLYLNSFYLGMFIVCEVAMGILK-AINVSYPENALLTEAGIFSALCFVEMIRI 295
           SSLA ++ LY N++Y  ++ V  + M  +K +I   Y +  ++T   +   +  +E IR+
Sbjct: 39  SSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSILPDYYKFIVIT---VIILITLIEAIRL 95

Query: 296 FLGRRGNLASKKIPV-----FLSVLLTIP 367
           +LG  GNL  +K+P       LS+LL +P
Sbjct: 96  YLGYVGNL-QEKVPELAGFWLLSLLLQLP 123


>AC107083-1|AAY24048.1|  106|Homo sapiens unknown protein.
          Length = 106

 Score = 37.1 bits (82), Expect = 0.078
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = +2

Query: 119 SSLAYEILLYLNSFYLGMFIVCEVAMGILK-AINVSYPENALLTEAGIFSALCFVEMIRI 295
           SSLA ++ LY N++Y  ++ V  + M  +K +I   Y +  ++T   +   +  +E IR+
Sbjct: 39  SSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSILPDYYKFIVIT---VIILITLIEAIRL 95

Query: 296 FLGRRGNLASK 328
           +LG  GNL  K
Sbjct: 96  YLGYVGNLQEK 106


>DQ496107-1|ABF47096.1|  555|Homo sapiens feline leukemia virus
           subgroup C cellular receptor protein.
          Length = 555

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +2

Query: 125 LAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIRIFLG 304
           L Y I++++    LG F+   + +G   A+ ++YPE+   T +G+ +A   +  I +F  
Sbjct: 422 LRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESE-GTSSGLLNASAQIFGI-LFTL 479

Query: 305 RRGNLASKKIPVFLSVLLTIPSAVGV 382
            +G L S   P   ++ L +   +G+
Sbjct: 480 AQGKLTSDYGPKAGNIFLCVWMFIGI 505


>BC048312-1|AAH48312.1|  555|Homo sapiens feline leukemia virus
           subgroup C cellular receptor 1 protein.
          Length = 555

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +2

Query: 125 LAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIRIFLG 304
           L Y I++++    LG F+   + +G   A+ ++YPE+   T +G+ +A   +  I +F  
Sbjct: 422 LRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESE-GTSSGLLNASAQIFGI-LFTL 479

Query: 305 RRGNLASKKIPVFLSVLLTIPSAVGV 382
            +G L S   P   ++ L +   +G+
Sbjct: 480 AQGKLTSDYGPKAGNIFLCVWMFIGI 505


>AK001419-1|BAA91679.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10557 fis, clone NT2RP2002537. ).
          Length = 279

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +2

Query: 125 LAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIRIFLG 304
           L Y I++++    LG F+   + +G   A+ ++YPE+   T +G+ +A   +  I +F  
Sbjct: 146 LRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESE-GTSSGLLNASAQIFGI-LFTL 203

Query: 305 RRGNLASKKIPVFLSVLLTIPSAVGV 382
            +G L S   P   ++ L +   +G+
Sbjct: 204 AQGKLTSDYGPKAGNIFLCVWMFIGI 229


>AF118637-1|AAD45243.1|  555|Homo sapiens feline leukemia virus
           subgroup C receptor FLVCR protein.
          Length = 555

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +2

Query: 125 LAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIRIFLG 304
           L Y I++++    LG F+   + +G   A+ ++YPE+   T +G+ +A   +  I +F  
Sbjct: 422 LRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESE-GTSSGLLNASAQIFGI-LFTL 479

Query: 305 RRGNLASKKIPVFLSVLLTIPSAVGV 382
            +G L S   P   ++ L +   +G+
Sbjct: 480 AQGKLTSDYGPKAGNIFLCVWMFIGI 505


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,644,996
Number of Sequences: 237096
Number of extensions: 1895809
Number of successful extensions: 2655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)