Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E04
         (832 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p pro...   118   7e-27
AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA ...   118   7e-27
AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB...   117   2e-26
AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p pro...    38   0.013
AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA...    38   0.013
AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p pro...    29   7.8  
AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan...    29   7.8  
AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA...    29   7.8  

>AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p
           protein.
          Length = 136

 Score =  118 bits (285), Expect = 7e-27
 Identities = 57/131 (43%), Positives = 82/131 (62%)
 Frame = +2

Query: 113 VNSSLAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIR 292
           +N+SL YEIL+YLNSFY GM+   EV +G+LKAIN++Y ENAL  EA I  +LC +E +R
Sbjct: 1   MNASLIYEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVR 60

Query: 293 IFLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXX 472
           I  GR+ +L+ +      SV+LT+PS   V Y   +QT++L+LE I  A+M+        
Sbjct: 61  IVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELV 120

Query: 473 XXXXXXXTVCK 505
                  T+C+
Sbjct: 121 YASIFICTMCR 131


>AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA
           protein.
          Length = 136

 Score =  118 bits (285), Expect = 7e-27
 Identities = 57/131 (43%), Positives = 82/131 (62%)
 Frame = +2

Query: 113 VNSSLAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIR 292
           +N+SL YEIL+YLNSFY GM+   EV +G+LKAIN++Y ENAL  EA I  +LC +E +R
Sbjct: 1   MNASLIYEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVR 60

Query: 293 IFLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXX 472
           I  GR+ +L+ +      SV+LT+PS   V Y   +QT++L+LE I  A+M+        
Sbjct: 61  IVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELV 120

Query: 473 XXXXXXXTVCK 505
                  T+C+
Sbjct: 121 YASIFICTMCR 131


>AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB,
           isoform B protein.
          Length = 149

 Score =  117 bits (282), Expect = 2e-26
 Identities = 56/135 (41%), Positives = 78/135 (57%)
 Frame = +2

Query: 116 NSSLAYEILLYLNSFYLGMFIVCEVAMGILKAINVSYPENALLTEAGIFSALCFVEMIRI 295
           N S+ YE+L+YLNSFY GMF  CE+AMG+LKAIN+SY  + L  + G+  +    E IR+
Sbjct: 15  NPSMNYEVLIYLNSFYFGMFACCEMAMGLLKAINLSYTGHTLALDTGVMISFIVFETIRL 74

Query: 296 FLGRRGNLASKKIPVFLSVLLTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXX 475
            +GR  +LA +     LSV +T P  VGV Y L+ QTY LRLEY  C + +         
Sbjct: 75  IMGRMSSLADRGWSAILSVFMTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWY 134

Query: 476 XXXXXXTVCKNQQFD 520
                 ++C+   +D
Sbjct: 135 AIVFVFSLCRPVTYD 149


>AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p
           protein.
          Length = 55

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 356 LTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXXTVCKNQQFD 520
           +T P  VGV Y L+ QTY LRLEY  C + +               ++C+   +D
Sbjct: 1   MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA,
           isoform A protein.
          Length = 55

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +2

Query: 356 LTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXXTVCKNQQFD 520
           +T P  VGV Y L+ QTY LRLEY  C + +               ++C+   +D
Sbjct: 1   MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>AY051698-1|AAK93122.1| 1637|Drosophila melanogaster LD24220p
           protein.
          Length = 1637

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 261 NIPASVNRAFSGYE-TFIAFNIPIATSQTINIPK 163
           +IP S N AFSG+   FI F   + +S T++  K
Sbjct: 409 SIPPSANPAFSGFHLPFIGFTFSLTSSSTLDSKK 442


>AF029395-1|AAB96643.1| 1613|Drosophila melanogaster Genghis Khan
           protein.
          Length = 1613

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 261 NIPASVNRAFSGYE-TFIAFNIPIATSQTINIPK 163
           +IP S N AFSG+   FI F   + +S T++  K
Sbjct: 385 SIPPSANPAFSGFHLPFIGFTFSLTSSSTLDSKK 418


>AE013599-3814|AAF47163.1| 1637|Drosophila melanogaster CG4012-PA
           protein.
          Length = 1637

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 261 NIPASVNRAFSGYE-TFIAFNIPIATSQTINIPK 163
           +IP S N AFSG+   FI F   + +S T++  K
Sbjct: 409 SIPPSANPAFSGFHLPFIGFTFSLTSSSTLDSKK 442


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,755,563
Number of Sequences: 53049
Number of extensions: 609410
Number of successful extensions: 1553
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)