Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_E03
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.2  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    24   2.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   2.8  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    24   2.8  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   3.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.0  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   6.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 333  FRRELSGNGGSPRNFGSSAISSVQCYKIY 247
            F + +S      RN   SA S   CYKIY
Sbjct: 3123 FDKRVSMISAPTRNMAKSAFSLRNCYKIY 3151


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 491 LKQIEIN*SIGNV*DLNPTG-EGAFGALVVPLVDPLIGAERPVHSLEIV 348
           L  I ++  +GNV     T  E   GA V+P +  L+   RP++ LE++
Sbjct: 86  LSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPIYYLEML 134


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 348  SMVRIFRRELSGNGG 304
            S++ +FRRE SG+GG
Sbjct: 1002 SVIGLFRRESSGSGG 1016


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -3

Query: 491 LKQIEIN*SIGNV*DLNPTG-EGAFGALVVPLVDPLIGAERPVHSLEIV 348
           L  I ++  +GNV     T  E   GA V+P +  L+   RP++ LE++
Sbjct: 86  LSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPIYYLEML 134


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +3

Query: 333 KYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNVPDAL 470
           K+ P Y FKR + ++   E  D W + +       R  +  V DAL
Sbjct: 472 KFNPDY-FKRDWSTIYGEELYDHWIDPQENMNLIDRAPLATVKDAL 516


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 325 AAKNTNHATISRECTGLSAPMSGSTSGTTS 414
           AA  TN +  S    G +AP SGS + +T+
Sbjct: 354 AAGTTNSSANSGTGGGTAAPSSGSNANSTA 383


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 337  TNHATISRECTGLSAPMSGSTSGTTSAPKAPSPV 438
            T H+  S   T +++  S ST+      K+ SPV
Sbjct: 957  TEHSVNSTNVTSINSSSSSSTADRNGDTKSRSPV 990


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 431 EGAFGALVVPLVDPLIGAERPVHSLEIV 348
           E   GA V+P +  L+   +PV+ +E++
Sbjct: 111 ENGGGAFVIPYIIVLLLVGKPVYYMEMI 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,622
Number of Sequences: 2352
Number of extensions: 12970
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)