Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E02
(550 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 25 0.44
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 25 0.58
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 25 0.58
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 1.8
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 3.1
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 4.1
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 21 5.4
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 5.4
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 5.4
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 5.4
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 5.4
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 5.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 9.4
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 25.0 bits (52), Expect = 0.44
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 188 YGFGFETSDGKTAQESAVLKNVGTENE 268
+G G ETS GK+ ES+ N G E +
Sbjct: 275 FGNGLETSWGKSRDESSWFYNSGWERK 301
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 24.6 bits (51), Expect = 0.58
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 404 WWFRLEGAGECLLRR 360
+W +L G GEC +RR
Sbjct: 406 YWIQLRGLGECGIRR 420
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 24.6 bits (51), Expect = 0.58
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 404 WWFRLEGAGECLLRR 360
+W +L G GEC +RR
Sbjct: 406 YWIQLRGLGECGIRR 420
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 23.0 bits (47), Expect = 1.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 242 LKNVGTENEALEVRGQYSYVDLDGKVHETTYTADENGFHPSGADIPQ 382
L+N G +E++ + ++ D HE+T NG G +IPQ
Sbjct: 10 LENAGMPDESINISDVIEVIETDPDFHESTMF---NG----GGEIPQ 49
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 22.2 bits (45), Expect = 3.1
Identities = 10/40 (25%), Positives = 14/40 (35%)
Frame = -2
Query: 351 PFSSAVYVVSWTFPSRSTYEYCPRTSRASFSVPTFFNTAD 232
P A Y + Y P + PT++N AD
Sbjct: 58 PAKRAAYDCEGVIRHHGQWNYSPDNHFEQYPNPTYYNLAD 97
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 158 QTFDNIGLEGYGFGFETSD 214
QTF N+ + G+G E+ D
Sbjct: 118 QTFSNLNISGFGGVQESGD 136
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 170 NIGLEGYGFGFETSD 214
N+GL YG GF +D
Sbjct: 259 NLGLGSYGRGFALAD 273
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 170 NIGLEGYGFGFETSD 214
N+GL YG GF +D
Sbjct: 259 NLGLGSYGRGFALAD 273
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 6 GRXQSASFHQAVNPHRTKPSLXNP 77
G Q A+ HQ PH+ P P
Sbjct: 191 GGQQGANMHQQGPPHQQPPIQQQP 214
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.4 bits (43), Expect = 5.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 312 PSRSTYEYCPRTSRASFSVPTFFNTADS 229
P+RS YE+ +TS S P + AD+
Sbjct: 119 PARSPYEWIKKTSYQSQPNPEPADFADA 146
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.4 bits (43), Expect = 5.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 312 PSRSTYEYCPRTSRASFSVPTFFNTADS 229
P+RS YE+ +TS S P + AD+
Sbjct: 119 PARSPYEWIKKTSYQSQPNPEPADFADA 146
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 6 GRXQSASFHQAVNPHRTKPSLXNP 77
G Q A+ HQ PH+ P P
Sbjct: 193 GGQQGANMHQQGPPHQQPPIQQQP 216
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 349 WFPSLRSRHSPAP 387
W+ + SRHSP P
Sbjct: 267 WWENYISRHSPIP 279
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 349 WFPSLRSRHSPAP 387
W+ + SRHSP P
Sbjct: 267 WWENYISRHSPIP 279
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 349 WFPSLRSRHSPAP 387
W+ + SRHSP P
Sbjct: 267 WWENYISRHSPIP 279
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 349 WFPSLRSRHSPAP 387
W+ + SRHSP P
Sbjct: 267 WWENYISRHSPIP 279
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 442 FVRSLWTTFFVGVGGLDLRELGNVCSGGMETI 347
FV+ + FFV V L + +L G+E +
Sbjct: 184 FVQQIPFCFFVRVIRLKIEDLNGAFRAGLERV 215
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,935
Number of Sequences: 336
Number of extensions: 2274
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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