Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_E01
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 34 0.018
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 33 0.031
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.13
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 31 0.22
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 29 0.51
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.68
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.89
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.89
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.6
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.7
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 2.7
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 26 4.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 4.8
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 6.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 6.3
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 26 6.3
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 6.3
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 25 8.3
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 25 8.3
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 34.3 bits (75), Expect = 0.018
Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 7/170 (4%)
Frame = +1
Query: 226 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXX 405
L+ K + +EN+L+ E L + N E + ++ AE ALN +
Sbjct: 748 LESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNK 807
Query: 406 XATATAKLSEASQAADESERARKVLENRSLADEERMDALE----NQLKEARFLAEEADKK 573
+ + +L E ++ + + L R A + + ++E NQ E + ++
Sbjct: 808 LSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESINKNQANELKLAKQKCSNL 867
Query: 574 YDEV--ARKLAMVEADLXXXXXXXXXXXXKIVE-LEEELRVVGNNLKSLE 714
+++ KLA + K L +EL+ V + SL+
Sbjct: 868 QEKINFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLK 917
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 33.5 bits (73), Expect = 0.031
Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +1
Query: 223 QLQKKIQTIENELDQT----QESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXX 390
Q +++T+ENEL Q QE + Q + +E + + +++ AL +
Sbjct: 437 QYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQILTWKNKYEALAKLYTQLRQEHL 496
Query: 391 XXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADK 570
K S A +A D+ E+ + ++N++L + + + E +
Sbjct: 497 DLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRD 556
Query: 571 KYDEVARKLAMVE 609
K + R+L +++
Sbjct: 557 KQESTERELRLLQ 569
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.5 bits (68), Expect = 0.13
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Frame = +1
Query: 220 RQLQKKIQTIENELDQTQESLMQ-------VNGKLEEKEKALQNAESEVAALNRRIQXXX 378
RQLQ ++ + ELD Q+ L + + ++EEKE + E+E + +Q
Sbjct: 288 RQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEENSSYVHLQEDY 347
Query: 379 XXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAE 558
A L+ + E++ + + L D ++ L+ QL +A E
Sbjct: 348 AILQAKCDEFADRIQVLTADLEKEKENQIMHESEASIGLTDSMQVHTLQEQLHKAN---E 404
Query: 559 EADKKYDEVAR 591
E + +D+++R
Sbjct: 405 EIEFLHDQISR 415
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 30.7 bits (66), Expect = 0.22
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -2
Query: 556 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGP 380
+RG + R R +P P SR+PY R RR PR +R RSR SR P
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.51
Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +1
Query: 259 LDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLS-- 432
L +QE L+Q+N KLE+ + S L+++++ ++
Sbjct: 480 LSDSQEELLQLNAKLEKANIVIDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKEQIESY 539
Query: 433 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 612
E ++ + R K E E+ + L QLK AR + + D + + ++
Sbjct: 540 ENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTARMKLADKYPQGDNTSENIDWLKH 599
Query: 613 DL 618
L
Sbjct: 600 SL 601
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 29.1 bits (62), Expect = 0.68
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Frame = +1
Query: 223 QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN----AESEVAALNRRIQXXXXXXX 390
+ Q K+ ENE+++ + + L+++EK L+N E +LN R
Sbjct: 207 EFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLSEANE 266
Query: 391 XXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKE---ARFLAEE 561
+ A + E N++ +E +++LE ++ + + L EE
Sbjct: 267 NFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIALEKQLLEE 326
Query: 562 ADKKYDEVARKLAMVE 609
A ++Y KLAMVE
Sbjct: 327 AVERY-----KLAMVE 337
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.89
Identities = 20/75 (26%), Positives = 27/75 (36%)
Frame = -2
Query: 538 PSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYV 359
P DS P + +AP + P P RD P T R P G +
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLM 538
Query: 358 GSGQPLRTQRSAEPS 314
+ QP++ EPS
Sbjct: 539 SADQPIKV---TEPS 550
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 0.89
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Frame = +1
Query: 226 LQKKIQTIENELDQTQESLMQ----VNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXX 393
+Q+K E L+ E+ Q V ++ +E+ + + SE+ LN+R++
Sbjct: 969 IQQKYLASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKES 1028
Query: 394 XXXXXATATAKLSEASQAADESERARKVLEN-RSLADEERMDALENQLKEARFLAEEADK 570
A +L +A + D + +K E RS AD + +L+ +++ R L +E
Sbjct: 1029 SSKELA---KQLEDAVREKDSALSFKKDYEKIRSDADRV-ITSLKEDIEKERSLMKECHS 1084
Query: 571 KYD 579
Y+
Sbjct: 1085 NYE 1087
Score = 28.3 bits (60), Expect = 1.2
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Frame = +1
Query: 229 QKKIQTIENELDQTQESLMQVNGKLE----EKE------------KALQNAESEVAALNR 360
+K++ +NEL+ Q + +GK E EKE + +QN +E+AAL
Sbjct: 1497 EKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLSAELAAL-- 1554
Query: 361 RIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRS--LADEER-MDALENQ 531
R A ++L E+++ E E+ ++L RS +A++E+ + LENQ
Sbjct: 1555 REHSPTQGSLENADEIARLRSQL-ESTKQYYEKEKETEILAARSELVAEKEKTKEELENQ 1613
Query: 532 LKE----ARFLAEEADKKYDE 582
L E + L E+A K E
Sbjct: 1614 LNEKSQRIKELEEQAQKNSSE 1634
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 424 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 600
KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701
Query: 601 MVEADL 618
+ ++++
Sbjct: 702 LEKSNI 707
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +1
Query: 460 ERARKVLENRSLADEERMDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 609
E +RK +E + LEN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 303 EASRKEMETHCAT----IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 439 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 579
S +++ +R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +1
Query: 223 QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNR 360
+LQK++QT+E E ++ +E L E+ L+ E+EV +L +
Sbjct: 624 ELQKRLQTLEEENNKAKEDSTSKTSNLLEQ---LKMTEAEVDSLRK 666
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 466 RARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQ 332
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 253 NELDQTQESLMQVNGK---LEEKEKALQNAESEVAALNRRIQ 369
N+L++ + + K L+EK K L+NA ++ L RRIQ
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVRRIQ 101
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/43 (20%), Positives = 31/43 (72%)
Frame = +1
Query: 226 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 354
LQ ++ + NEL ++++ + ++ K + +++++++ ESE++++
Sbjct: 149 LQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSSV 191
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 4.8
Identities = 29/109 (26%), Positives = 37/109 (33%)
Frame = -2
Query: 625 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 446
R + P P P P PP LP G P AP P + AP + A +
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 445 PGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQRSAEPSPSLRA 299
P P A AP + P PA + + A S+RA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPAAPVASIAELPQQDGRANLMASIRA 509
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 6.3
Identities = 21/92 (22%), Positives = 37/92 (40%)
Frame = +1
Query: 433 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 612
+A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 613 DLXXXXXXXXXXXXKIVELEEELRVVGNNLKS 708
L IV +EE + V K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 220 RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQ 327
R+L+K + NE+ QESL + N L + +A++
Sbjct: 646 RELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIR 681
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 194 VLXRPKNXRDSFRRRSRQLKTSSTRHRSLSCRLTESSKRR 313
++ P+N DS RR+ K + R + RL E+S++R
Sbjct: 354 IVSHPRNVADSLRRKDDSRKRARDRKKE---RLEEASQKR 390
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 616 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 524
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 235 KIQTIENELDQTQESLMQVNGKLEEKEKAL 324
KI + D+T E + + G EE EKAL
Sbjct: 353 KISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 232 KKIQTIENELDQTQESLMQVNGKLEE 309
+KIQT+E + +T++ L G+L++
Sbjct: 785 EKIQTLERRISETEKELESYAGQLQD 810
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.122 0.309
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,154,258
Number of Sequences: 5004
Number of extensions: 37352
Number of successful extensions: 155
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -