Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D23
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   0.98 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   3.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   3.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   5.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   5.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.1  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 56  FPHTDFTLCKCLLLESVVENETIS 127
           F   DF+LCK +L+ ++    T S
Sbjct: 78  FTVIDFSLCKAILVHAITIRSTFS 101


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 381 RLPSSLHPYFLTQCFNVTSSI 319
           R P  +H YF+   + V SS+
Sbjct: 21  RFPHRIHSYFMVAFYVVFSSV 41


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 381 RLPSSLHPYFLTQCFNVTSSI 319
           R P  +H YF+   + V SS+
Sbjct: 21  RFPHRIHSYFMVAFYVVFSSV 41


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 188 LYSKTEQSHIAPECRLSI*FEKLSHF 111
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 188 LYSKTEQSHIAPECRLSI*FEKLSHF 111
           +Y + ++  I   CR SI    L+HF
Sbjct: 45  MYHRVKEEPIYESCRFSINQPYLNHF 70


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 128 EKLSHFPPRIQEV 90
           E L HFP RIQ +
Sbjct: 268 ELLRHFPERIQSL 280


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = +2

Query: 338 KHWVKKYGW 364
           +HW+ +Y W
Sbjct: 150 EHWLSRYSW 158


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = +2

Query: 338 KHWVKKYGW 364
           +HW+ +Y W
Sbjct: 150 EHWLSRYSW 158


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 188 LYSKTEQSHIAPECRLSI*FEKLSHF 111
           +Y   ++  I   CR SI    L+HF
Sbjct: 45  MYHSVKEEPIYESCRFSINQPYLNHF 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,080
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)