Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D23
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-10|CAB04732.1| 240|Caenorhabditis elegans Hypothetical p... 112 2e-25
AY731377-1|AAW63419.1| 240|Caenorhabditis elegans eukaryotic in... 112 2e-25
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 27 6.5
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 27 6.5
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 27 6.5
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical... 27 8.6
>Z81592-10|CAB04732.1| 240|Caenorhabditis elegans Hypothetical
protein T16G1.11 protein.
Length = 240
Score = 112 bits (269), Expect = 2e-25
Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 19/165 (11%)
Frame = +2
Query: 29 QILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH----- 193
Q+LLK L P +DF L KCL+ + + ++ + +I L +LE C+FA FW V
Sbjct: 67 QVLLKTLMVLPSSDFALAKCLIDTNRLGSQELRRIFDLGAVLESCNFAVFWKLVKGAYKP 126
Query: 194 ------------QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTL 337
++P++ + GF D+++ + C V+ +TFQ I+K L+ LLGG D +
Sbjct: 127 TTNPNEPFKVPGEVPKMIKPMVGFEDAVKHYACRVISVTFQKIEKKMLSRLLGGASDKEV 186
Query: 338 KHWVKKYGW--RDDGSLIFIANQDENIKTKNITEKIEFDHLAPLM 466
+ +GW +++G + F+AN + IKT+NI EKI+F H+A L+
Sbjct: 187 TALAQSFGWEAKENGDVFFVANHEGTIKTRNIDEKIQFPHVADLL 231
>AY731377-1|AAW63419.1| 240|Caenorhabditis elegans eukaryotic
initiation factor eIF-3.K protein.
Length = 240
Score = 112 bits (269), Expect = 2e-25
Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 19/165 (11%)
Frame = +2
Query: 29 QILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVH----- 193
Q+LLK L P +DF L KCL+ + + ++ + +I L +LE C+FA FW V
Sbjct: 67 QVLLKTLMVLPSSDFALAKCLIDTNRLGSQELRRIFDLGAVLESCNFAVFWKLVKGAYKP 126
Query: 194 ------------QMPELCSRISGFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTL 337
++P++ + GF D+++ + C V+ +TFQ I+K L+ LLGG D +
Sbjct: 127 TTNPNEPFKVPGEVPKMIKPMVGFEDAVKHYACRVISVTFQKIEKKMLSRLLGGASDKEV 186
Query: 338 KHWVKKYGW--RDDGSLIFIANQDENIKTKNITEKIEFDHLAPLM 466
+ +GW +++G + F+AN + IKT+NI EKI+F H+A L+
Sbjct: 187 TALAQSFGWEAKENGDVFFVANHEGTIKTRNIDEKIQFPHVADLL 231
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 92 LLESVVENETISQIKYLADILEQCD---FAQFWNRVHQMPELCSRISGF-HDSIRK 247
LL+ E I IK+ DI + + ++W+ V +MPE S S F + SIR+
Sbjct: 233 LLQMGRYTEAIESIKFYYDIEDSDEDEIIKEYWDMVPEMPEQLSLCSAFSNSSIRR 288
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 357 YFLTQCFNVTSSIPPNRFARLFLSIV*NVIPTT*QTNFLIE 235
YF+ Q SSIP NR F + V +P T + N L E
Sbjct: 581 YFIVQQLLADSSIPRNRSVSPFSNNVTFTVPRTPRNNILTE 621
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 62 HTDFT-LCKCLLLESVVENETISQIKYLADILEQC 163
H FT C L + ++NET + + YL +L+QC
Sbjct: 305 HDTFTEFCGKLDILHYIDNETFNHLIYLQRLLQQC 339
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 62 HTDFT-LCKCLLLESVVENETISQIKYLADILEQC 163
H FT C L + ++NET + + YL +L+QC
Sbjct: 305 HDTFTEFCGKLDILHYIDNETFNHLIYLQRLLQQC 339
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 62 HTDFT-LCKCLLLESVVENETISQIKYLADILEQC 163
H FT C L + ++NET + + YL +L+QC
Sbjct: 305 HDTFTEFCGKLDILHYIDNETFNHLIYLQRLLQQC 339
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 62 HTDFT-LCKCLLLESVVENETISQIKYLADILEQC 163
H FT C L + ++NET + + YL +L+QC
Sbjct: 305 HDTFTEFCGKLDILHYIDNETFNHLIYLQRLLQQC 339
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 62 HTDFT-LCKCLLLESVVENETISQIKYLADILEQC 163
H FT C L + ++NET + + YL +L+QC
Sbjct: 305 HDTFTEFCGKLDILHYIDNETFNHLIYLQRLLQQC 339
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 372 SSLHPYFLTQCFNVTSSIPPNRF 304
S++H YF C N T+ PPN F
Sbjct: 64 STMHTYFSFLCTNSTNISPPNVF 86
>AF016448-17|AAB65962.1| 656|Caenorhabditis elegans Hypothetical
protein F41E6.14 protein.
Length = 656
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 53 NFPHTDFTLCKCLLLESVVENETISQIKYLAD-ILEQCDFAQFWNRVHQMPELCSRISGF 229
NF T FT+ CL + +EN +K L++ ++E +F +N+ + + + F
Sbjct: 351 NFTITAFTIGMCLAMIPWIENNQCLAMKTLSNPLIENAEFN--FNKSNTIIPISDLGCDF 408
Query: 230 HDSIRKFVCHVVGITFQTIDKNNLANLL 313
+++ K + GI + + N ++
Sbjct: 409 NETTAKLPLNTFGIEYCSKKGNGTGTIM 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,931,472
Number of Sequences: 27780
Number of extensions: 273305
Number of successful extensions: 603
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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