Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D20
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 142 2e-34
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 142 2e-34
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 137 7e-33
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 137 7e-33
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 107 5e-24
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 107 5e-24
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 107 5e-24
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 93 2e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 93 2e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 72 3e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 72 3e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 72 3e-13
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 66 3e-11
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 59 3e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 59 3e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 59 3e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 59 3e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 59 3e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 59 3e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 5e-09
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 56 2e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 54 9e-08
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 54 9e-08
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 54 9e-08
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 54 9e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 50 1e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 1e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 8e-06
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 48 8e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 2e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 2e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 45 5e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 44 7e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 7e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 3e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 4e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 9e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 9e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 40 0.001
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 39 0.004
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.005
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.005
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.005
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.005
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.005
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.005
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.005
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 38 0.008
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 38 0.008
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 38 0.008
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 38 0.008
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.019
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.044
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.044
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 35 0.044
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.058
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.058
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 35 0.058
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 34 0.077
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 34 0.077
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.24
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.31
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.31
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.31
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.72
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.72
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 1.7
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 2.2
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 29 2.9
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 29 2.9
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 29 2.9
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.8
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC084158-35|AAP31421.1| 157|Caenorhabditis elegans Resistance t... 28 6.7
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 6.7
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 8.9
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 142 bits (344), Expect = 2e-34
Identities = 69/159 (43%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 362 GEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQ 538
E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + +E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 539 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
R+ F FI FE E+ + K+T G +E DV +A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 142 bits (344), Expect = 2e-34
Identities = 69/159 (43%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGG+S E +++L HF YGE+ VK D GRSRGFAF+ F E +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 362 GEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQ 538
E TI K V+ K AK+R K+FVGGL S+ S+ ++R+ F +FG + +E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 539 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
R+ F FI FE E+ + K+T G +E DV +A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 137 bits (331), Expect = 7e-33
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 9/167 (5%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+F+GGLSW+ T + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 362 GEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEM 514
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 515 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
FDK + +GF F+TF+S++V + + + I GK V+ +A PK
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/97 (29%), Positives = 48/97 (49%)
Frame = +2
Query: 365 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRK 544
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 545 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
GF FITF V+ +L + + GK++D A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 137 bits (331), Expect = 7e-33
Identities = 64/167 (38%), Positives = 101/167 (60%), Gaps = 9/167 (5%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+F+GGLSW+ T + LRD+FG +GE+ V DP T R+RGF FI F P S+DKV+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 362 GEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEM 514
EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G + +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 515 PFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
FDK + +GF F+TF+S++V + + + I GK V+ +A PK
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/97 (29%), Positives = 48/97 (49%)
Frame = +2
Query: 365 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRK 544
E +N D GK+F+GGLS + + + +R++F FG + + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 545 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
GF FITF V+ +L + + GK++D A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 107 bits (258), Expect = 5e-24
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 362 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXV 508
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 509 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
E+ DK + +GF F+TF+ V+ + + G DV + K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 107 bits (258), Expect = 5e-24
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 362 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXV 508
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 509 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
E+ DK + +GF F+TF+ V+ + + G DV + K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 107 bits (258), Expect = 5e-24
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGGL+ TD +R+ + +GEI I V DP T RSRGF F+ F +D M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 362 GEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXV 508
H I+ K VDPK+A R K ++V G+ + ++D + +F+++GT+
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 509 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
E+ DK + +GF F+TF+ V+ + + G DV + K
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Frame = +2
Query: 227 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 406
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 407 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFC 553
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 554 FITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
F+TF+ V+ + + G DV + K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 362 GEHTINNKKVDPKKAKAR 415
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Frame = +2
Query: 227 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 406
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 407 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFC 553
R K ++V G+ + ++D + +F+++GT+ E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 554 FITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
F+TF+ V+ + + G DV + K
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 362 GEHTINNKKVDPKKAKAR 415
H +N + D +K ++
Sbjct: 137 KSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 72.1 bits (169), Expect = 3e-13
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
PQ+R KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F +
Sbjct: 46 PQLR----KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 101
Query: 338 SIDKVMAAGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SD 460
S + M H + K VD K+A R K+ + G+++ + S
Sbjct: 102 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 161
Query: 461 DEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVD 634
D +R +F FGT+ VE+ Q +G F+ +E ++ + L + + + ++++
Sbjct: 162 DSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 216
Query: 635 VXRATPKP 658
V T P
Sbjct: 217 VRVFTKHP 224
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 72.1 bits (169), Expect = 3e-13
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
PQ+R KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F +
Sbjct: 66 PQLR----KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 121
Query: 338 SIDKVMAAGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SD 460
S + M H + K VD K+A R K+ + G+++ + S
Sbjct: 122 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 181
Query: 461 DEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVD 634
D +R +F FGT+ VE+ Q +G F+ +E ++ + L + + + ++++
Sbjct: 182 DSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 236
Query: 635 VXRATPKP 658
V T P
Sbjct: 237 VRVFTKHP 244
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 72.1 bits (169), Expect = 3e-13
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 21/188 (11%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
PQ+R KLF+GGLS + TD++L ++F +G + V DPNT SRGF F+ F +
Sbjct: 67 PQLR----KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 122
Query: 338 SIDKVMAAGEHTINNKKVDPKKAKARHG------------------KIFVGGLSSEI-SD 460
S + M H + K VD K+A R K+ + G+++ + S
Sbjct: 123 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 182
Query: 461 DEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVD 634
D +R +F FGT+ VE+ Q +G F+ +E ++ + L + + + ++++
Sbjct: 183 DSLRVYFETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIE 237
Query: 635 VXRATPKP 658
V T P
Sbjct: 238 VRVFTKHP 245
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 361
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 362 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 521 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVXRATPK 655
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 36.7 bits (81), Expect = 0.014
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 26/139 (18%)
Frame = +2
Query: 239 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 379
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 380 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 521 DKTKNQRKGFCFITFESEQ 577
D+ + KGF F+ FE +
Sbjct: 351 DE-NGRSKGFGFVCFEKPE 368
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 65.7 bits (153), Expect = 3e-11
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 361
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 362 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
++ K + DP ++ G IF+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 521 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVXRATPK 655
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 368
Score = 37.1 bits (82), Expect = 0.011
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +2
Query: 239 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 379
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 380 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 521 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXRATPK 655
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 351 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 395
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
P + L++G L + ++ L + F G + SI V D + S G+A++ F+ P
Sbjct: 50 PNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPA 109
Query: 338 SIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 493
++ + I+ + + DP +A +G IF+ L I + + + FS FG
Sbjct: 110 DAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
Query: 494 TILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVXRATPK 655
IL ++ D N KG+ F+ FE+E + K + K+V V + P+
Sbjct: 170 NILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 QRXVAVLRKLXTVLXPQV-RAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPN 289
+R + RK + +V R L+V + + D LRDHF ++G I S V D N
Sbjct: 320 ERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN 379
Query: 290 TGRSRGFAFIVFKAPE 337
GRS+GF F+ F+ PE
Sbjct: 380 -GRSKGFGFVCFEKPE 394
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES-- 340
RA +F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQ 199
Query: 341 --IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFS 484
I+KV M + + K P+ + + + +FV + +++ FS
Sbjct: 200 TAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFS 259
Query: 485 EFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
+FG I + D + + KGF F+ F + ++
Sbjct: 260 KFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 44.8 bits (101), Expect = 5e-05
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 343
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 344 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 466
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXR 643
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 644 ATPK 655
A K
Sbjct: 418 AQRK 421
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
P + L++G L + ++ L + F G + SI V D + S G+A++ F+ P
Sbjct: 50 PNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPA 109
Query: 338 SIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFG 493
++ + I+ + + DP +A +G IF+ L I + + + FS FG
Sbjct: 110 DAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFG 169
Query: 494 TILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVXRATPK 655
IL ++ D N KG+ F+ FE+E + K + K+V V + P+
Sbjct: 170 NILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 113 QRXVAVLRKLXTVLXPQV-RAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPN 289
+R + RK + +V R L+V + + D LRDHF ++G I S V D N
Sbjct: 320 ERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN 379
Query: 290 TGRSRGFAFIVFKAPE 337
GRS+GF F+ F+ PE
Sbjct: 380 -GRSKGFGFVCFEKPE 394
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES-- 340
RA +F+ L +K + D F +G I S V TD + G S+G+ F+ F+ S
Sbjct: 141 RAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHSAQ 199
Query: 341 --IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRNFFS 484
I+KV M + + K P+ + + + +FV + +++ FS
Sbjct: 200 TAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFS 259
Query: 485 EFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
+FG I + D + + KGF F+ F + ++
Sbjct: 260 KFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVE 296
Score = 44.8 bits (101), Expect = 5e-05
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 343
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 344 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 466
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXR 643
+R+ FS FGTI ++ D+ + KGF F+ FE E+ + + IG K + V
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVAL 417
Query: 644 ATPK 655
A K
Sbjct: 418 AQRK 421
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 509 EMPFDKTKNQRKGFCFITF 565
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 58.0 bits (134), Expect = 5e-09
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAA 361
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 362 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILXV-EMPF 520
+ K + KA A IFVG L E+ + + + FS FG IL V ++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 521 DKTKNQRKGFCFITFESEQVVNDLLK 598
D KGF FI F S + + L+
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALE 160
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 604
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 605 KR-TIGGKEVDVXRAT 649
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 58.0 bits (134), Expect = 5e-09
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAA 361
++VGGL + ++ L + G + S+N+ D T +GF F+ F E D +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 362 GEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTILXV-EMPF 520
+ K + KA A IFVG L E+ + + + FS FG IL V ++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 521 DKTKNQRKGFCFITFESEQVVNDLLK 598
D KGF FI F S + + L+
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALE 170
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+FVG L E +K L D F A+G I + + D ++G S+GFAFI F + E+ D + A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 604
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 605 KR-TIGGKEVDVXRAT 649
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
L V G+ ++ TD+ + +F G + +K + G S+GF F+ + +KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 365 EHTINNKKVDPKKAKARH-------GKIFVGGLSSEISDDEIRNFF-SEFGTILXVEMPF 520
+H I+ ++ D K R +IFVG L+ ++ + ++R F E + + +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 521 DK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPK 655
D +GF F+T S + ++ T+ G V + A P+
Sbjct: 294 DVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
K+FVGGL + +DK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 362 GEHTINNKKVD 394
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 601
KIFVGGL SD + +F +FG I + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 602 PKRTIGGKEVDVXRA 646
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 361
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 362 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDK 526
+ NK + P + + ++V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 527 TKNQRKGFCFITFESEQVVNDLLKT 601
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 601
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 602 PKRTIGGKEVDVXRATPKP 658
+ GK + V + P
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 54.4 bits (125), Expect = 7e-08
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Frame = +2
Query: 161 QVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-- 334
Q + +++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Query: 335 -----ESIDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLS 445
ES++ M G + N + P +K ++ +++V +
Sbjct: 156 ALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVH 215
Query: 446 SEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
++S+ ++++ F FG I+ ++ T +GF ++ F +
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 358
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.4 bits (125), Expect = 7e-08
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Frame = +2
Query: 161 QVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-- 334
Q + +++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Query: 335 -----ESIDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLS 445
ES++ M G + N + P +K ++ +++V +
Sbjct: 156 ALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVH 215
Query: 446 SEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
++S+ ++++ F FG I+ ++ T +GF ++ F +
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 358
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.4 bits (125), Expect = 7e-08
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Frame = +2
Query: 161 QVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP-- 334
Q + +++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Query: 335 -----ESIDKVMAAGEH-------------TINNKKVDP-----KKAKARHGKIFVGGLS 445
ES++ M G + N + P +K ++ +++V +
Sbjct: 156 ALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVH 215
Query: 446 SEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
++S+ ++++ F FG I+ ++ T +GF ++ F +
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 358
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 54.0 bits (124), Expect = 9e-08
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESID-- 346
A K+FVG + + + + R F YG + S N+ D +T S+G F+ F ++I+
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 347 ------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 499
KV+ H + K D + R K+F+G LS + +++ +R F++FG I
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 377 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCF 556
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 557 ITF 565
+TF
Sbjct: 101 VTF 103
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 325
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 326 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 427
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 428 -FVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 236 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 415
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 416 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR--------KGFCFITFES 571
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 572 EQVVNDLLKTPKR 610
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 325
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 326 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 427
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 428 -FVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 236 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 415
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 416 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR--------KGFCFITFES 571
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 572 EQVVNDLLKTPKR 610
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVF 325
R + K+FVGG+S K + FG +G + VK PN+ G+S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 326 KAPESIDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI------ 427
+S+ K+M+A N ++ P KARH +I
Sbjct: 261 SDEQSVIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRT 320
Query: 428 -FVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +2
Query: 236 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 415
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 416 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR--------KGFCFITFES 571
K+FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 572 EQVVNDLLKTPKR 610
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
+++ + W +L +F YG I+S+N+ DP+TG RGFA I F + + +K +
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 365 EHTINNKKVD 394
H I+ +VD
Sbjct: 87 PHVIDGDRVD 96
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +2
Query: 371 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGF 550
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 551 CFITFESEQVVNDLLKTPKRTIGGKEVDVXRATP 652
ITF+S+ N ++ I G VDV P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +2
Query: 161 QVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 340
Q + A ++VG + W+ T E+ +HF G++ + + D TG + FAF+ F+ ES
Sbjct: 40 QEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLES 99
Query: 341 IDKVMAAGEHTINNKKV 391
+ + N+K+
Sbjct: 100 VQLALVLSGTMFRNRKI 116
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 52.0 bits (119), Expect = 4e-07
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVK----------------TDPNTGRSRG 307
A +FVG + +K +R F +G I S+ ++ T +
Sbjct: 142 ALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLNDKQSS 201
Query: 308 FAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDE 466
F V F A ES++K + +H I KV KK + + IFVG L EI++D
Sbjct: 202 LTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDA 261
Query: 467 IRNFFS-EFGTILXVEMPFDKTKNQRKGFCFITFESEQVVN 586
+ FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 262 LITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+ +A
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS--LAL 305
Query: 362 GEHTINNKKVDPKKAK 409
TI +K D + K
Sbjct: 306 SMETIKMEKRDLRITK 321
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
A LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + +
Sbjct: 167 ATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAI 222
Query: 353 MAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 511
A E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 223 QAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 598
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 599 TPKRTI--GGKEVDV 637
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
A LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + +
Sbjct: 167 ATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAI 222
Query: 353 MAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 511
A E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 223 QAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 598
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 599 TPKRTI--GGKEVDV 637
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
A LFVG + + ++E+R F +G++E +++KT NT +AF++F+ + +
Sbjct: 144 ATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAI 199
Query: 353 MAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEIRNFFSEFGTILXVE 511
A E + + K +GK +FVGGL S + ++ F EFG + ++
Sbjct: 200 QAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 598
+FVG + S++ + EIR+ F E G + V++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 599 TPKRTI--GGKEVDV 637
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +2
Query: 146 TVLXPQVRAAAX--KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 319
++L P+ +A A ++VG + + T +E+ HF G + + ++ D +G +GFA++
Sbjct: 65 SLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYV 124
Query: 320 VFKAPESIDKVMAAGEHTINNK--KVDPKK 403
F E + +A + + + KVDPK+
Sbjct: 125 EFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 398 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 578 VVNDLLKTPKRTIGGKEVDV-XRATPKP 658
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 50.8 bits (116), Expect = 8e-07
Identities = 28/101 (27%), Positives = 54/101 (53%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
+++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S ++A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TILAV- 96
Query: 365 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 487
N + + + H + + E +DDE + + E
Sbjct: 97 -DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---------- 325
A KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 326 ------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 487
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 488 FGTILXVEMPFDKTKNQRKGFCFITFE 568
FG + V + KG F+ ++
Sbjct: 147 FGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 328
P+ + KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 117 PKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 343
L+VG L T+ + F G + V D G + +AF+ F +A +++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTM 104
Query: 344 DKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSEFGTILXV 508
+K + N V+P + ++ RH +FVG LSSE+ + ++R F FG +
Sbjct: 105 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 164
Query: 509 EMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVXRATPKP 658
++ D + KG+ F+++ + E+ + + + +G + + AT KP
Sbjct: 165 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP 215
Score = 49.2 bits (112), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 358
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 359 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 466
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 631
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 256 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---------- 325
A KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 326 ------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 487
K +++ M +++ PK K K+F+G LS + S+DE+R F+
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFAT 146
Query: 488 FGTILXVEMPFDKTKNQRKGFCFITFE 568
FG + V + KG F+ ++
Sbjct: 147 FGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 328
P+ + KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+ +K
Sbjct: 117 PKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+++VG + + + L F G+I + + DP +G SRG+AF+ + E
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 362 GE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI----RNFFSEFGTILXVEMPFDK 526
+ H I+ K + ++F+G + S DEI + ++ +P D
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DN 319
Query: 527 TKNQRKGFCFITFESEQVVNDL 592
K + +GFCF+ F + +D+
Sbjct: 320 EKIKNRGFCFVDFIDHKTASDI 341
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 49.2 bits (112), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 358
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 359 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 466
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 631
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 143 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 413 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF-ESEQVVND 589
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 590 LLKTPKRTIGGKEVDVXRATPKP 658
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 49.2 bits (112), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 358
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 359 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 466
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 631
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 153 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 413 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF-ESEQVVND 589
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 590 LLKTPKRTIGGKEVDVXRATPKP 658
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 49.2 bits (112), Expect = 3e-06
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 358
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 359 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 466
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 467 IRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEV 631
IR F+ FG I V + + +G+ F+ F++ + +++ + +GG+ V
Sbjct: 224 IRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 413 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF-ESEQVVND 589
RH +FVG LSSE+ + ++R F FG + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 590 LLKTPKRTIGGKEVDVXRATPKP 658
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTK 532
++VG L S +++D I F++ G++ ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.8 bits (111), Expect = 3e-06
Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAPESIDKV 352
A +FV L + T+ E+R A + SI N+ RGFA++V + + +
Sbjct: 592 ARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQQA 648
Query: 353 MAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNFFSEFGT 496
+ + + + DP+K K+FV + + +DDE++ FS+FGT
Sbjct: 649 LLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGT 708
Query: 497 ILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVXRATP 652
+ V K + KG F+ F++E + + K + +E++V + P
Sbjct: 709 VTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
+FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +2
Query: 416 HGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLL 595
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 596 K 598
+
Sbjct: 164 E 164
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.2 bits (107), Expect = 1e-05
Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA- 361
+FVG LS + +++ L+ F +GE+ V D T +S+G+ F+ F ++ + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 362 -----GEHTI--------NNKKVDPK--------KAKARHGKIFVGGLSSEISDDEIRNF 478
G+ + N+++ K KA + ++VG +S + +D ++R+
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 479 FSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEV 631
FS +G I V + K QR + F+ +E ++ +++ + + G +V
Sbjct: 257 FSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/70 (24%), Positives = 43/70 (61%)
Frame = +2
Query: 368 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKG 547
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 548 FCFITFESEQ 577
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 167 RAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 346
+A ++VG +S + TD +LRD F YG+I + + +++ +AF+ ++ E
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECAT 286
Query: 347 KVM 355
K +
Sbjct: 287 KAI 289
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
++VG ++ T++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESE 574
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESE 574
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 392 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 572 EQVV-NDLLKTPKRTIGGKEVDVXRATPK 655
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 305
Score = 37.1 bits (82), Expect = 0.011
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +2
Query: 239 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 379
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 380 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 521 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXRATPK 655
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 288 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 332
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 598
+IFVGG + ++ E+R F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 599 TPKR 610
TPK+
Sbjct: 126 TPKQ 129
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/105 (22%), Positives = 52/105 (49%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
P ++FVGG T+ ELR+HF + ++ + + + G+S+G+ FI F+ +
Sbjct: 59 PTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETED 117
Query: 338 SIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 472
+++ +K+ PK+ + R K+ +G +I+ + +
Sbjct: 118 QAEEI----------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 598
+IFVGG + ++ E+R F +F + V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 599 TPKR 610
TPK+
Sbjct: 127 TPKQ 130
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/105 (22%), Positives = 52/105 (49%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
P ++FVGG T+ ELR+HF + ++ + + + G+S+G+ FI F+ +
Sbjct: 60 PTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETED 118
Query: 338 SIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 472
+++ +K+ PK+ + R K+ +G +I+ + +
Sbjct: 119 QAEEI----------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
L V LS T+K+LRD FG +GEI ++ D +G SRGF FI F E
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 431 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF 565
V LSS ++ ++R+ F EFG I ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
L+V L D L+ F +YG I S V TD N GRS+GF F+ F+ PE
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPE 308
Score = 37.1 bits (82), Expect = 0.011
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 27/166 (16%)
Frame = +2
Query: 239 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTIN------------ 379
F +G I S V T G+S+GF F+ F PE + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 380 ---------NKKVDPKKA----KARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF 520
KK + KA K + ++V L + DD ++ F +G I ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 521 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVXRATPK 655
D+ + KGF F+ FE E+ + + + + + K + V A K
Sbjct: 291 DE-NGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRK 335
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 398 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF-ESE 574
K +RH +FVG L SEI ++R F +FG + ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 575 QVVNDLLKTPKRTIGGKEVDVXRATPKP 658
+ + +G + + AT KP
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKP 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 368 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR 541
H + K D +A A + ++VG +++ + +DEIR F FG I V +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 542 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 631
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
L + ++ + ++L + F A G + + + TD TGRS+G ++ F ES+ +A
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 86
Query: 365 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 478
+ + ++ A + + V L +I + IR+
Sbjct: 87 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 146
Query: 479 FSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
F FG I +++ D + R GF ITF +
Sbjct: 147 FESFGRIEKIDLEVDSNRENR-GFATITFRN 176
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 380 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFI 559
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 560 TFESEQVV 583
F E+ V
Sbjct: 72 EFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 22/151 (14%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
L + ++ + ++L + F A G + + + TD TGRS+G ++ F ES+ +A
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 231
Query: 365 EHTINNKKVDPKKAKARHGK----------------------IFVGGLSSEISDDEIRNF 478
+ + ++ A + + V L +I + IR+
Sbjct: 232 GQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDI 291
Query: 479 FSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
F FG I +++ D + R GF ITF +
Sbjct: 292 FESFGRIEKIDLEVDSNRENR-GFATITFRN 321
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 380 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFI 559
N K++ + + + ++ + ++ FFS G + V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 560 TFESEQVV 583
F E+ V
Sbjct: 217 EFWDEESV 224
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 431 VGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 191 VGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 358
V L E + ELRD FG G + I + D TG +GFAF+ F++ + + +A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
++VG ++ T+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESE 574
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
LFVG +++E ++ +LR F AYG+I+ + + D G+ RG+AFI +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 358
L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 413 RHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFE-SEQVVND 589
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 590 LLKTPKRTIGGKEVDVXRATP 652
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 158 PQVRAAAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
PQ +FV + E T+ ++ D F YG+I++I++ D TG +G+A + ++ +
Sbjct: 48 PQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQK 107
Query: 338 SIDKVMAAGEHTI---NNKKVD 394
++ + T N KVD
Sbjct: 108 EANEAIDQSNDTDLLGQNVKVD 129
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 604
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 605 KRT-IGGKEVDV 637
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 340
+LF+ L + + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 362 GEHTINNKK 388
T N K
Sbjct: 63 SNQTFFNSK 71
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 197 GLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 376
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 377 NNKKVD 394
++ ++
Sbjct: 68 GSRYIE 73
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +2
Query: 437 GLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 616
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 617 GGKEVDVXRATPKP 658
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 197 GLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 376
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 377 NNKKVD 394
++ ++
Sbjct: 68 GSRYIE 73
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +2
Query: 437 GLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 616
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 617 GGKEVDVXRATPKP 658
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
A +F+G + + T +E+ +HF G+I + D T + + FA+I F SI+ +
Sbjct: 54 AKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
A +F+G + + T +E+ +HF G I + D T + + FA+I F SI+ +
Sbjct: 60 AKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/62 (27%), Positives = 38/62 (61%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
+A K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 347
Query: 353 MA 358
+A
Sbjct: 348 IA 349
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF 565
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMA 358
K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 359 AGEHTINNKKV 391
+ + +++
Sbjct: 66 RDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMA 358
K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++ D V A
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 359 AGEHTINNKKV 391
+ + +++
Sbjct: 66 RDGYEFDGRRI 76
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/62 (27%), Positives = 38/62 (61%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
+A K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 347
Query: 353 MA 358
+A
Sbjct: 348 IA 349
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF 565
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/62 (27%), Positives = 38/62 (61%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
+A K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 322
Query: 353 MA 358
+A
Sbjct: 323 IA 324
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF 565
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/62 (27%), Positives = 38/62 (61%)
Frame = +2
Query: 173 AAXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 352
+A K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 325
Query: 353 MA 358
+A
Sbjct: 326 IA 327
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF 565
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/79 (21%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 598
++F G L +E+SD+ + F ++ + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 599 TPKRTIGGKEVDVXRATPK 655
+ +G + + + ++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 362 -GEHTINNKKVDPKKAKARHGKI 427
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
L + LS++ T +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 325
L + LS++ T +LR F YG+I +++ D + +S+GF F+ F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+++V + + +++L F AYG + S+ + T N S+GF F+ + ES +K AA
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIESCEKARAA 109
Query: 362 -GEHTINNKKVDPKKAKARHGKI 427
E + + ++ ++A K+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKL 132
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQ 577
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/85 (22%), Positives = 39/85 (45%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
L+VG LS+ + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 365 EHTINNKKVDPKKAKARHGKIFVGG 439
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 36.3 bits (80), Expect = 0.019
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +2
Query: 152 LXPQVRAAAXKLFVGGL----SWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 319
L P L++G L + + T+K+L D F YG+I + V T+ +G AFI
Sbjct: 226 LSPPADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFI 279
Query: 320 VFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 424
F E+ ++ A E + N + K+ R G+
Sbjct: 280 EFTTREAAER---AAERSFNKTFIKGKRLTIRWGE 311
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/159 (23%), Positives = 67/159 (42%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 362 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR 541
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 542 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPKP 658
G + FE + N+ + + +V + A+PKP
Sbjct: 229 TGEGIVEFERKPNCNEAMAAIR-----DKVFLLTASPKP 262
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESE 574
PKK ++FVG L +E+ + E++ FS G I + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 575 QVVNDLLKT-PKRTIGGKEVDV 637
+ R I G++V V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/159 (23%), Positives = 67/159 (42%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+LFVG L E + EL++ F +G+I + +GFAF+ + A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRLDTRAHAESAKEA 169
Query: 362 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR 541
+ I + + + I V LS +S++ + + FS FG + D+ K +
Sbjct: 170 IDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDVERAVHIVDE-KGRP 228
Query: 542 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVXRATPKP 658
G + FE + N+ + + +V + A+PKP
Sbjct: 229 TGEGIVEFERKPNCNEAMAAIR-----DKVFLLTASPKP 262
Score = 31.5 bits (68), Expect = 0.54
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 395 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESE 574
PKK ++FVG L +E+ + E++ FS G I + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 575 QVVNDLLKT-PKRTIGGKEVDV 637
+ R I G++V V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 364
L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I A
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAKTAC 74
Query: 365 EH 370
EH
Sbjct: 75 EH 76
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 601
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 602 PK-RTIGGKEVDVXRATPK 655
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/88 (21%), Positives = 40/88 (45%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
A ++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV 53
Query: 356 AAGEHTINNKKVDPKKAKARHGKIFVGG 439
H +N K++ ++ + K GG
Sbjct: 54 ----HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 601
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 602 PK-RTIGGKEVDVXRATPK 655
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/88 (21%), Positives = 40/88 (45%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
A ++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV 53
Query: 356 AAGEHTINNKKVDPKKAKARHGKIFVGG 439
H +N K++ ++ + K GG
Sbjct: 54 ----HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.058
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 601
+I++G L+S +S+ +I +FF +G I V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 602 PK-RTIGGKEVDVXRATPK 655
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/88 (21%), Positives = 40/88 (45%)
Frame = +2
Query: 176 AXKLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 355
A ++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV 53
Query: 356 AAGEHTINNKKVDPKKAKARHGKIFVGG 439
H +N K++ ++ + K GG
Sbjct: 54 ----HDLNGKELGGERVILDYSKPRGGG 77
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 517
K+FVGGL S + + +I NFFS +G L V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 34.3 bits (75), Expect = 0.077
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYG 253
K+FVGG+ W+ T+ L+D FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMP 517
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 595
+++VGG S+ +S ++IRN ++ V + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 349
LFV L+ TD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 349
LFV L+ TD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 349
LFV L+ TD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFES 571
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 598
K++VGGL S+ + E+ F FG I V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 185 LFVGGLSWEPTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+F+GG+ ++L R G YG++ + + DP +G A + F ++ + ++
Sbjct: 367 VFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISG 426
Query: 362 G----EHTINNKKVDPK 400
H NNK+V+ K
Sbjct: 427 RFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 502
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +2
Query: 185 LFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 334
+F+ LS++ ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 395 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 499
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 161 QVRAAAXKLFVGGLSWEP-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 337
+++ + +LFV + T KEL+ +FGAYG+I + +D + G F I F
Sbjct: 25 KLKVESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSR 82
Query: 338 SIDKVM 355
S+D ++
Sbjct: 83 SVDVLL 88
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-XVEMPFDKTKNQ 538
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 539 RKGFCFIT 562
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 362 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL-XVEMPFDKTKNQ 538
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 539 RKGFCFIT 562
GFC T
Sbjct: 88 GFGFCHFT 95
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRN------FFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVV 583
K F+GGL + +I F E + + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 584 N 586
N
Sbjct: 67 N 67
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +2
Query: 422 KIFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 601
++++G L + SD ++ +FF +G + V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 602 PKRTIGGKEV 631
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 29.9 bits (64), Expect = 1.7
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +2
Query: 458 DDEIRNFFSEFGTILXVEMPFDKTKNQRKGFCFITFESEQV 580
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 425 IFVGGLSSEISDDEIRNFFSEFGTILXVEMPFDK 526
++VG L S +++D I F++ G++ ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 248 YGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 427
+ + SI+ T+ + + E K+ E+ + ++ + K +H +
Sbjct: 54 FNRLASISKDTEKIANAVKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQ-KIKHRTV 112
Query: 428 FVGGLSSEISDDEIRNFFSEFGTILXVEMPFDKTKNQR-KGFCFITFESEQ 577
++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 113 YMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Frame = +2
Query: 182 KLFVGGLSWE-------PTDKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFIVFK 328
K+++GG++ E + E++ F YGEIE + V PN FAFI +
Sbjct: 327 KIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFITMR 386
Query: 329 APESIDKVMAA 361
+ + A
Sbjct: 387 NKAGVKAIFEA 397
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 362 -GEHTINNKKVDPKKAKAR-HGK 424
TI ++V+ A R H K
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 KLFVGGLSWEPTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 361
+L V + ++ + +L F G + ++V+ N S+GF F+ + P+ D+ A
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 362 -GEHTINNKKVDPKKAKAR-HGK 424
TI ++V+ A R H K
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 191 VGGLSWEPTDKELRDHFGAYGEIESIN--VKTDPNTGRSRGFAFIVFKAPESI 343
+G + WE K+++D F +YG I+ DP R+R + + P I
Sbjct: 69 LGKMMWEAGSKQVQDTFQSYGRIDLFRPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 609 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTXKI 496
L+G L S+ ++ PF +FF+ S+G ST KI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AC084158-35|AAP31421.1| 157|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 8, isoform b
protein.
Length = 157
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -1
Query: 253 TVCSKMITELLICGLPAQPTNKKFXGGSADLGPQHCXELAKHRHRALXCHEAGW 92
TV SK I L I PA+ N GG A + QH L + R++ C W
Sbjct: 106 TVHSKAILSLKILEFPAKNHNFSTNGG-AKMSNQHFVSLTTN-ERSILCKPENW 157
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 299 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 418
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 276 RQIQTQADHEGLPSLCLR 329
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,276,278
Number of Sequences: 27780
Number of extensions: 260080
Number of successful extensions: 982
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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