Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D19
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    25   0.78 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.0  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
 Frame = +3

Query: 378 LLYRCYTDYI*FIFLIPKITFKMKTSKCII-GIITVSRELFLKISHYAFS*HLKTVY--Y 548
           L+++CY     + F    ITF +     +  G  TV    +     +     L T Y  Y
Sbjct: 46  LVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105

Query: 549 STFILLCY*YFNQFSFIILYHII 617
           +  ILLC  YF     I   H++
Sbjct: 106 AFIILLCVYYFYYAFIIFTVHLL 128



 Score = 25.4 bits (53), Expect = 0.45
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 329 YYTITYLCTYQ*FNIAFIV*MLHRLYLIYIF 421
           Y  I  LC Y  F  AFI+  +H L+L+ I+
Sbjct: 105 YAFIILLCVYY-FYYAFIIFTVHLLFLLCIY 134



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 26/115 (22%), Positives = 43/115 (37%)
 Frame = +1

Query: 259 ICFNSFE*HC*ISYVTLSYLYKHILHNYLPMYLSIIQHCVYCIDVTQIIFDLYF*FXXXX 438
           +C   F  H       + +    +L  Y   Y  II  CVY      IIF ++  F    
Sbjct: 74  LCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCI 133

Query: 439 XXXXXPNASLE*LLSRENYF*KFHTTLFLSI*KQFIIQHLYYFVTNILINFHLLY 603
                P   L  LL    ++  F   +  ++   F++   ++F   I+   HLL+
Sbjct: 134 YYFVVP---LFFLLCIYYFYCAF---IIFTVHLLFLLCIYHFFCAFIIFTMHLLF 182



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 25/112 (22%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
 Frame = +3

Query: 306 FILSL*TYITQLLTYVPINNSTLRLLYRCYTDYI*FIFLI-------PKITFKMKTSKCI 464
           F+L    +   LL Y P    T+  L   Y  Y  FI L+         I F +     +
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLL 131

Query: 465 IGIITVSRELFLKISHYAFS*HLKTVYYSTFILLCY*YFNQFSFIILYHIIC 620
                V    FL   +Y +   +    +  F+L  Y +F  F    ++ + C
Sbjct: 132 CIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 194 EVSSVPVLNHIEPHRRCSLNQQFVLIPLSNIVK*VT*LY 310
           +  ++P L ++EP+ R  L  +  L  L NIVK +   Y
Sbjct: 96  DYDAIPWLQNVEPNLRPKLLLKHNLFLLDNIVKPIIAFY 134


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 295 SYVTLSYLYKHILHNYLPMYLSIIQHCV-YCIDV 393
           +Y  L+ +    ++  LP+ LSI+++C+ YC ++
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 295 SYVTLSYLYKHILHNYLPMYLSIIQHCV-YCIDV 393
           +Y  L+ +    ++  LP+ LSI+++C+ YC ++
Sbjct: 257 AYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 452 FQMHHWNNYCLE 487
           F    W+NYC+E
Sbjct: 316 FNAKPWSNYCVE 327


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 332 YTITYLCTY 358
           YT+T+LC Y
Sbjct: 286 YTVTFLCLY 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,118
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)