Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D19
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130541-1|AAI30542.1|  664|Homo sapiens zinc finger protein 710...    31   3.0  
BC126476-1|AAI26477.1|  664|Homo sapiens zinc finger protein 710...    31   3.0  
AK094712-1|BAC04404.1|  664|Homo sapiens protein ( Homo sapiens ...    31   3.0  
AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>BC130541-1|AAI30542.1|  664|Homo sapiens zinc finger protein 710
           protein.
          Length = 664

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -1

Query: 105 ACPGPNLEETAAELRRPIKAADRSHTRTKARP 10
           AC G  LEE A E    ++AA   HTR K RP
Sbjct: 70  ACNGRALEEPAEEEVLEVEAACEKHTRRKTRP 101


>BC126476-1|AAI26477.1|  664|Homo sapiens zinc finger protein 710
           protein.
          Length = 664

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -1

Query: 105 ACPGPNLEETAAELRRPIKAADRSHTRTKARP 10
           AC G  LEE A E    ++AA   HTR K RP
Sbjct: 70  ACNGRALEEPAEEEVLEVEAACEKHTRRKTRP 101


>AK094712-1|BAC04404.1|  664|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37393 fis, clone BRAMY2027073, moderately
           similar to Fugu rubripes zinc finger protein. ).
          Length = 664

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -1

Query: 105 ACPGPNLEETAAELRRPIKAADRSHTRTKARP 10
           AC G  LEE A E    ++AA   HTR K RP
Sbjct: 70  ACNGRALEEPAEEEVLEVEAACEKHTRRKTRP 101


>AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46490 fis, clone THYMU3027540. ).
          Length = 129

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +1

Query: 298 YVTLSYLYKHILHNYLPMYLSIIQHCVY 381
           YV +S++Y ++ H Y+ MY++ +  CVY
Sbjct: 68  YVCISHIYMYVYHAYMCMYITYM--CVY 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,202,387
Number of Sequences: 237096
Number of extensions: 1521747
Number of successful extensions: 6424
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6422
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)