Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D18
(828 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0358 - 17177253-17177369,17177635-17177931,17178961-171790... 88 9e-18
02_03_0288 - 17328805-17328828,17328888-17328989,17329069-173292... 35 0.069
03_05_0349 + 23356871-23356907,23356995-23357063,23357236-233574... 34 0.16
02_03_0297 - 17408902-17409045,17409134-17409304,17410563-174106... 33 0.37
09_01_0120 + 1839097-1839277,1840315-1840443,1841694-1841833,184... 32 0.48
08_02_0077 - 11979497-11979654,11980012-11982178 32 0.48
02_03_0298 - 17428616-17428738,17428822-17428992,17429913-174300... 32 0.48
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 31 1.1
08_01_0832 - 8101657-8101708,8102581-8102660,8102740-8102910,810... 30 2.0
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16... 29 3.4
03_05_0691 + 26788372-26788459,26788635-26788703,26789355-267895... 29 3.4
09_04_0369 - 17009308-17009501,17009528-17009714,17009802-170101... 29 4.5
12_02_1244 + 27302715-27302754,27302865-27302936,27303250-273034... 29 6.0
05_06_0003 + 24797098-24797223,24797981-24798193,24798289-247984... 28 7.9
03_05_0694 + 26844075-26844217,26844417-26844489,26844577-268447... 28 7.9
03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640... 28 7.9
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394 28 7.9
>07_03_0358 -
17177253-17177369,17177635-17177931,17178961-17179032,
17179117-17179383,17179752-17179910,17180194-17180295,
17180696-17180767,17181105-17181200,17181710-17181871,
17181941-17182021,17182837-17183094,17183173-17183275,
17183412-17183542,17184827-17184919,17184999-17185099,
17186271-17186355,17186487-17186701,17186779-17186842,
17187128-17187214,17188922-17189022,17190206-17190397,
17190533-17190599,17191211-17191351
Length = 1020
Score = 87.8 bits (208), Expect = 9e-18
Identities = 58/217 (26%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Frame = +3
Query: 165 SLEIPLMSTDEVIDLDPEQLPS-GDEVLSILQQERSQLNVWINVALAYYKQKKIDDFLKI 341
S+ IP+ T+E + + +QLP+ ++L IL+ E++ L++W+ +A Y+KQ KI+ F +I
Sbjct: 3 SVYIPVQGTEEEVRVALDQLPADASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFRQI 62
Query: 342 L-EASRTDANIDYRDFERDQMRALDMLAAYYVQXXXXXXXXXXXXXXXXXATLLYTMADK 518
L E S + + Y D + +++ L+ L A++ AT Y A +
Sbjct: 63 LEEGSGPEIDEYYADVKYERIAILNALGAFHT-FLGKVERAQQKEVHFKEATQCYNRASR 121
Query: 519 IIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAF----NRKD 686
I + + +GR C+++ D ++ A F VL++ +N P+LLG+A + F + +
Sbjct: 122 IDETEPSTWIGRGQLCVVKHD-LQMASDSFKIVLDEDGSNFPALLGQASVYFLMGDSEQQ 180
Query: 687 YRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQE 797
++ AL +Y+ +L P + + M L E
Sbjct: 181 HKKALDYYRNSLDLYKLDPENIDALVALAIMDLQTNE 217
>02_03_0288 -
17328805-17328828,17328888-17328989,17329069-17329239,
17329471-17329572,17331257-17331387,17335329-17335460,
17335616-17335792,17335897-17336077
Length = 339
Score = 35.1 bits (77), Expect = 0.069
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXMAFE 818
A KDYRGA+ Y KA+ N A+L C++KL EKA + E
Sbjct: 226 AVKNKDYRGAMHIYTKAIALN-TRDASLFSNRSLCWLKLGEGEKALIDAE 274
>03_05_0349 +
23356871-23356907,23356995-23357063,23357236-23357424,
23358148-23358249,23358451-23358582,23359499-23359638,
23360169-23360252,23360608-23360748,23361815-23361916,
23362239-23362409,23362452-23362571
Length = 428
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 588 EQADAQFNFVLNQSPNN---VPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALRL 758
E+ DA + +N P N + A +KDY A FY +A+ +PD A L
Sbjct: 287 EEIDANHHIPVNDKPVNRRKIAEFKSLGLEAVEKKDYLSAAGFYSEAMDLDPDD-ATLLS 345
Query: 759 GMGHCFMKLNNQEKA 803
C++ L KA
Sbjct: 346 NRSLCWLYLGEGGKA 360
>02_03_0297 -
17408902-17409045,17409134-17409304,17410563-17410664,
17412605-17412718,17413095-17413178,17413669-17413808,
17414429-17414560,17415430-17415618,17415736-17415801,
17415905-17415938
Length = 391
Score = 32.7 bits (71), Expect = 0.37
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 585 MEQADAQFNFVLNQSPNN---VPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALR 755
ME+ A N N P N L A +KDY A FY KAL PD A L
Sbjct: 241 MEETGANCNISDNGEPVNKRKATDLKSLGNKAVEKKDYLSATGFYSKALYLYPDD-ATLF 299
Query: 756 LGMGHCFMKLNNQEKAXM 809
C+ ++ + KA +
Sbjct: 300 SNRSLCWHRMGDGGKALL 317
>09_01_0120 +
1839097-1839277,1840315-1840443,1841694-1841833,
1842291-1842419,1845311-1845463,1845803-1845904,
1846797-1846976,1847070-1847149,1847413-1847442,
1847958-1848057
Length = 407
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXT--NPDSPAALRLGMGHCFMKLNNQEKA 803
AF RKDY A Y AL +PD A L C+++L N ++A
Sbjct: 263 AFKRKDYLLAAQLYTSALGLGPSPDDSATLLANRSLCWLRLENGKQA 309
>08_02_0077 - 11979497-11979654,11980012-11982178
Length = 774
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +3
Query: 672 FNRKDYRGALAFYKKALXTNP-----DSPAALRLGMGHCFMKL 785
FNR+DY GA Y KA+ P D+ A LR + C+M++
Sbjct: 38 FNRRDYEGAAFKYDKAVQLLPSGGHADAAAHLRTCVAQCYMRM 80
>02_03_0298 -
17428616-17428738,17428822-17428992,17429913-17430014,
17431654-17431764,17432142-17432228,17432551-17432588,
17432830-17432833,17433280-17433419,17434189-17434320,
17435289-17435354,17435966-17436013,17436055-17436160
Length = 375
Score = 32.3 bits (70), Expect = 0.48
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +3
Query: 585 MEQADAQFNFVLNQSP---NNVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALR 755
ME+ A N N P L A +KDY A FY KAL PD A L
Sbjct: 232 MEETGANRNISDNGEPVSKRKATELKSLGNKAVEKKDYLSATGFYSKALDLYPDD-ATLF 290
Query: 756 LGMGHCFMKLNNQEKAXM-AFE 818
C+ + N KA + A+E
Sbjct: 291 SNRSLCWHHMGNGGKALLDAYE 312
>08_02_0204 -
14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 636 NVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXM 809
++ L +AF K+Y A FY KA+ +PD A L C+++ + KA +
Sbjct: 213 SITELKSLGSMAFQSKNYLHAAGFYSKAMDLDPDD-ATLFSNRSLCWLRRGHGGKALL 269
>08_01_0832 -
8101657-8101708,8102581-8102660,8102740-8102910,
8104181-8104282,8105245-8105346,8106246-8106374,
8106521-8106565,8109387-8109502,8109602-8109670,
8109756-8109801
Length = 303
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXM 809
A +R+DY A AFY KA+ +P+ A L C++ + + +KA +
Sbjct: 188 AVDREDYISASAFYTKAMDLDPND-ATLFSNRSLCWLCMGDGKKAFL 233
>05_01_0024 -
164618-165139,166884-166949,167046-167216,167321-167422,
167538-167600,167679-167825,168234-168359,168742-168921,
169183-169322,169688-169861,170096-170123
Length = 572
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKA 803
AF KDY A+ Y +A+ NP+ A L C+++ E+A
Sbjct: 305 AFRNKDYLVAVDAYTQAIELNPND-ATLHSNRSLCWLRAGQAERA 348
>03_05_0691 +
26788372-26788459,26788635-26788703,26789355-26789528,
26790347-26790478,26791730-26791869,26791966-26792073,
26792222-26792347,26792569-26792733,26793085-26793186,
26794519-26794689,26794773-26794852,26795130-26795193
Length = 472
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKA 803
A KDY GA FY +A+ +P + A L C++K +A
Sbjct: 353 AVQGKDYVGASKFYSEAIQLDP-TDATLHSNRSFCYLKSGEAREA 396
>09_04_0369 -
17009308-17009501,17009528-17009714,17009802-17010167,
17010341-17010450,17012422-17012656
Length = 363
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 594 ADAQFNFVLNQS----PNNVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAAL 752
AD FNFVLN S N+ L + + N + Y ++ + ++ D+PA +
Sbjct: 201 ADPLFNFVLNNSIYQILGNITELKDQLKLGLNLRSYEKVYLQFRNEIGSSVDAPATI 257
>12_02_1244 +
27302715-27302754,27302865-27302936,27303250-27303423,
27303533-27303667,27304407-27304546,27304844-27304933,
27305064-27305186,27305590-27305742,27306032-27306148,
27306818-27306988,27307082-27307161,27307238-27307262
Length = 439
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKA 803
AF ++DY A FY +AL +P L C++++ + E+A
Sbjct: 333 AFKKQDYLNASVFYTQALKVDP-FDGTLFSNRSLCWLRMGDGERA 376
>05_06_0003 +
24797098-24797223,24797981-24798193,24798289-24798444,
24798555-24798959
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 603 QFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMK 782
+F + Q + + LG A + + +Y A Y+KA PD+ A LG+ C +K
Sbjct: 152 KFQVSIQQETSRILGNLGWAYM--QQSNYSAAELVYRKAQSIEPDANRACNLGL--CLIK 207
Query: 783 LNNQEKA 803
+ ++A
Sbjct: 208 QSRHDEA 214
>03_05_0694 +
26844075-26844217,26844417-26844489,26844577-26844781,
26845516-26845655,26846858-26846983,26847455-26847622,
26848486-26848650,26849433-26849594,26849682-26849761,
26849975-26850038
Length = 441
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKL 785
A RKDY GA FY +A+ +P + A L C +++
Sbjct: 325 AVKRKDYHGASIFYTEAIELDP-TDATLYSNRSLCHLQM 362
>03_05_0688 +
26762668-26762893,26763027-26763101,26763865-26764032,
26764983-26765114,26765538-26765677,26765840-26765908,
26766325-26766435,26766854-26766973,26768223-26768324,
26769608-26769778,26769865-26769944,26770119-26770182
Length = 485
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 669 AFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXM 809
AF DY GA+ FY +A+ +P + A L C ++ ++A +
Sbjct: 366 AFEEGDYAGAIIFYTEAMKLDP-ADATLYSNRSLCHLRSGAAQEALL 411
>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
Length = 1456
Score = 28.3 bits (60), Expect = 7.9
Identities = 24/101 (23%), Positives = 46/101 (45%)
Frame = +3
Query: 135 EVIKNKKIKMSLEIPLMSTDEVIDLDPEQLPSGDEVLSILQQERSQLNVWINVALAYYKQ 314
E I+ +K+ + +S D+ ++ L S L+ + Q + W + A
Sbjct: 1246 EAIREMWLKLLQALKKLSLDQREEVRNHALTSLQRCLTATEGVCLQSSTWSH-AFDLVIF 1304
Query: 315 KKIDDFLKILEASRTDANIDYRDFERDQMRALDMLAAYYVQ 437
+DD +LE S+ + DYR+ E + A+ ++A Y+Q
Sbjct: 1305 ALLDD---LLEISQNHSQKDYRNMEGSLVLAMKLVAKVYLQ 1342
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,012,333
Number of Sequences: 37544
Number of extensions: 414341
Number of successful extensions: 1009
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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