Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D18
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr...   200   1e-51
U58763-2|AAK68876.1|  673|Caenorhabditis elegans Metaphase-to-an...    38   0.007
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    38   0.012
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc...    31   1.3  
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac...    31   1.3  
AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical ...    31   1.3  
AF016427-4|AAB65353.1|  774|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z68316-1|CAA92680.1|  213|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    28   7.1  
U28409-3|AAN60500.1|  327|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
           protein B0464.2 protein.
          Length = 1150

 Score =  200 bits (488), Expect = 1e-51
 Identities = 103/238 (43%), Positives = 154/238 (64%), Gaps = 6/238 (2%)
 Frame = +3

Query: 132 NEVIKNKKIKMSLEIPLMST--DEVIDLDPEQLPSGDEVLSILQQERSQLNVWINVALAY 305
           +E I + +   ++ IPL  +  DEVI+++  +LP G+EVL IL+ E ++L+ WI VAL Y
Sbjct: 2   DESIDDVQETRTIAIPLKDSHEDEVIEINCSELPDGEEVLQILEAEEAKLSYWIEVALEY 61

Query: 306 YKQKKIDDFLKILEASRTDANIDYRDFERDQMRALDMLAAYYVQXXXXXXXXXXXXXXXX 485
           Y+Q ++D F+ ILE++ + A ++Y   ++DQMRALD+LAAY++                 
Sbjct: 62  YRQDRVDLFMMILESAGSRAGLEYEGVKQDQMRALDILAAYWMTQGYREKAKDKKSDFFS 121

Query: 486 XATLLYTMADKIIMYDQNHLLGRAYFCLLEGD----KMEQADAQFNFVLNQSPNNVPSLL 653
            AT+L+  ADKI MY+ +HL  RA+F L E D    K E AD QFN+V+  +P NV  L+
Sbjct: 122 KATVLFNTADKIAMYEWSHLTVRAWFYLFERDKSTNKYELADQQFNYVVKTNPKNVLPLI 181

Query: 654 GKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXMAFERAL 827
           GKA IAFN+KDY+ A+ +++KA+     + A LR+G+GHCF K+   +KA  AFERA+
Sbjct: 182 GKAVIAFNKKDYKTAIYYFRKAIRQCRHTIADLRVGIGHCFAKMGMMDKAKTAFERAM 239


>U58763-2|AAK68876.1|  673|Caenorhabditis elegans
           Metaphase-to-anaphase transitiondefect protein 3
           protein.
          Length = 673

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 19/50 (38%), Positives = 32/50 (64%)
 Frame = +3

Query: 678 RKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXMAFERAL 827
           R+D   A+ F+++AL  NP   AAL + +GH FM++ N   A +++ RA+
Sbjct: 413 RRDSEHAIKFFQRALRLNPGL-AALWVLIGHEFMEMKNNAAACVSYRRAI 461


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +3

Query: 564 CLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSP 743
           C  E   + +A A+ N +LN  P++   L  +A      +DY  A+  Y+KA   NPD  
Sbjct: 300 CQREAGHISEAIAECNEILNDDPSDADILCERAEAHILDEDYDSAIEDYQKATEVNPDHR 359

Query: 744 AALRLGMGH 770
            A + G+ H
Sbjct: 360 EA-KEGLEH 367


>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
           transferase protein.
          Length = 1151

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 591 QADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALXTN 731
           +A+   N V    PNN+P+LL  + I F  K+   ++ +   A+  N
Sbjct: 143 EAEKYCNLVFQSDPNNLPTLLLLSAINFQTKNLEKSMQYSMLAIKVN 189


>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
           transferase protein1, isoform a protein.
          Length = 1151

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 591 QADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGALAFYKKALXTN 731
           +A+   N V    PNN+P+LL  + I F  K+   ++ +   A+  N
Sbjct: 143 EAEKYCNLVFQSDPNNLPTLLLLSAINFQTKNLEKSMQYSMLAIKVN 189


>AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.3 protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +1

Query: 337 RSWKHHVQMPTLTIGISKEIRCGLSTC-WPHTMCKKLTKRSQKIRKKNYLQRQHYCTL-W 510
           RS + H+ +PT     ++  RC  STC W H +   L +    I  + ++++  Y  + +
Sbjct: 50  RSMQEHLSVPTYCTDPNESFRCSSSTCYWLHRIVLNLPR--FMISGEFFVEKCAYLLIFF 107

Query: 511 RIKLLCMIRTIFLVEH 558
            I     +  ++LV+H
Sbjct: 108 FISCTMFLYAVYLVKH 123


>AF016427-4|AAB65353.1|  774|Caenorhabditis elegans Hypothetical
           protein F32D1.3 protein.
          Length = 774

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 627 SPNNVPSLLGKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAX 806
           +P +V  L   A   F+ ++Y  +L FY+KAL  +P    +L+ G+ +   +  N  ++ 
Sbjct: 649 APESVTVLQNIALAEFHMQNYNRSLLFYRKALHLDPTHLDSLQ-GIANLLQQTQNHVESE 707

Query: 807 MAFERAL 827
             + + +
Sbjct: 708 TFYRKVM 714


>Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical
           protein C17G1.1 protein.
          Length = 280

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 511 RIKLLCMIRTIFLVEHISAYWKVTKW 588
           R KL+C+  ++F +  +S  W ++KW
Sbjct: 2   RFKLVCLFLSLFALPSVSLTWDMSKW 27


>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
           protein D2021.1 protein.
          Length = 1168

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
 Frame = +3

Query: 651 LGKAC-IAFNRKDYRGALAFYKKALXTNPD---SPAALRLGMGHCFMKLNNQEKAXMAFE 818
           L K C +     D+ GAL  Y++ L  +PD      ++  G+G  ++     + A  AF 
Sbjct: 94  LAKQCHVVLLANDWTGALELYQEVLSHHPDLFSHDPSMYFGLGLVYLHFKQWKPAIEAFT 153

Query: 819 RAL 827
           R L
Sbjct: 154 RLL 156


>Z68316-1|CAA92680.1|  213|Caenorhabditis elegans Hypothetical
           protein K08E4.2 protein.
          Length = 213

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 558 YFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDY 689
           + C L GD  E  D QF+ + N+   ++   + K    F   DY
Sbjct: 166 FLCRLRGDMPEDDDNQFHDIFNRDGRDIVRRVNKLVENFELTDY 209


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 150 YF*LLHYTKFTSLLTKIYXNVYLSRFLCMYNILKIFFFFW 31
           Y  L H+   T     +   +YL  FL + + ++  FFFW
Sbjct: 6   YINLTHFQNHTEYFPYLKNYLYLEFFLYIIDTIQFSFFFW 45


>U28409-3|AAN60500.1|  327|Caenorhabditis elegans Hypothetical
          protein T25D10.1 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 93 NVYLSRFLCMYNILKIFFFFWSLWPHRPAEF 1
          N+  SR +C+ +I+ +     SL+PH+  +F
Sbjct: 7  NLNSSRIICIISIIVLLLIIISLYPHKRTQF 37


>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 654 GKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXMAFERAL 827
           GKA  AF+  D+  AL  +  A+  NP S A L     +  +KL     A    ++A+
Sbjct: 120 GKAQEAFSNGDFDTALTHFTAAIEANPGS-AMLHAKRANVLLKLKRPVAAIADCDKAI 176


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 654 GKACIAFNRKDYRGALAFYKKALXTNPDSPAALRLGMGHCFMKLNNQEKAXMAFERAL 827
           GKA  AF+  D+  AL  +  A+  NP S A L     +  +KL     A    ++A+
Sbjct: 120 GKAQEAFSNGDFDTALTHFTAAIEANPGS-AMLHAKRANVLLKLKRPVAAIADCDKAI 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,856
Number of Sequences: 27780
Number of extensions: 394812
Number of successful extensions: 990
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)