Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D18
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    29   0.052
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.0  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   4.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   4.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 29.1 bits (62), Expect = 0.052
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = -2

Query: 431 IVCGQHVESPHLISFEIPIVNVGICT 354
           +VC  +V++ ++I+F  PI+ + +CT
Sbjct: 806 LVCNSYVDASYMIAFAYPIMLIVVCT 831


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +3

Query: 144 KNKKIKMSLEIPLMSTDEVIDLDPEQLPSGDEVLSILQQERSQLNVW 284
           + K+++ +L  PL+S ++++     +   GD + ++LQ+ +     W
Sbjct: 706 EEKEVEKALLKPLLSLEDLVRFSTLEGSGGDSLRTLLQRGQETGAEW 752


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = -2

Query: 134 IIQNSLVC*LKFTXTYIYRVF---CVCTTY*KFFFFFGVC 24
           I+   ++C L F   Y+ R F   C+  T     F+ G C
Sbjct: 14  IVGGFILCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLGYC 53


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
 Frame = -2

Query: 134 IIQNSLVC*LKFTXTYIYRVF---CVCTTY*KFFFFFGVC 24
           I+   ++C L F   Y+ R F   C+  T     F+ G C
Sbjct: 462 IVGGFILCWLPFFTMYLVRAFCRNCIHPTVFSVLFWLGYC 501


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 282 WINVALAYYKQKKIDDFLKIL 344
           WI   + YYK  KI D  K L
Sbjct: 66  WIFSCIGYYKLNKIHDAYKDL 86


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   RPADEATNSKKKKKFLICCTYTKNAIN 86
           RP+DEA  S   KK  I  ++ ++ IN
Sbjct: 270 RPSDEAEPSSTSKKSGIVRSHQQSCIN 296


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +3

Query: 147 NKKIKMSLEIPLMSTDEVIDLD---PEQLPSGDEVLSILQQERSQ 272
           N +  + L +P + + E+ DLD    E L SG  +    + E S+
Sbjct: 514 NTQYNLDLSLPQLDSTELADLDISLSENLSSGLSISDSTKPETSK 558


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,232
Number of Sequences: 438
Number of extensions: 4839
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)