Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D17
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0098 - 12844631-12845074,12845329-12846570 131 5e-31
02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785 41 0.001
05_04_0094 + 17888998-17889589,17889668-17889795,17889879-178901... 38 0.012
02_02_0092 + 6686658-6687246,6687343-6687749,6687875-6688378,668... 38 0.012
01_07_0131 + 41292800-41293400,41293522-41293649,41293759-412940... 38 0.012
01_06_0894 - 32781957-32782287,32783019-32783284,32783771-327840... 36 0.036
01_01_0688 - 5267781-5267814,5269851-5270153,5270605-5270870,527... 34 0.11
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 34 0.11
06_03_0532 - 21844213-21844252,21844579-21844836,21845303-218455... 33 0.33
08_02_0917 - 22609543-22609852,22609925-22610266,22610596-226108... 32 0.44
04_04_0548 + 26172595-26173189,26173346-26173473,26173606-261738... 32 0.58
10_08_0414 + 17755427-17756000,17756181-17756308,17756434-177566... 31 1.0
04_04_0106 + 22823781-22823878,22824887-22825325,22825578-228257... 31 1.3
04_03_0930 - 20891334-20891511,20891958-20892109,20892737-208931... 31 1.3
05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330 30 1.8
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 29 5.4
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 29 5.4
02_01_0384 - 2781362-2782299,2782320-2782428 29 5.4
12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903 28 7.2
07_03_1107 - 24024387-24024497,24025799-24026410 28 7.2
10_08_0050 + 14469879-14470072,14470620-14471094 28 9.5
04_04_0517 + 25841292-25842099,25842256-25842308 28 9.5
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 131 bits (317), Expect = 5e-31
Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 7/214 (3%)
Frame = +1
Query: 145 VVEXRWVIVILALLPMSAAWKLWSIIRNYVVFKMNSAP---KMHDDKVKEVQRQIKEWLS 315
+V+ RW++VI +LP+SA ++I V M S K HDD V++V +++K+ +
Sbjct: 21 LVKFRWILVIFVVLPISALI-YFNIYLGDVWSAMKSEKRRQKEHDDNVQKVVKRLKQ-RN 78
Query: 316 GDKSTHLCTARPTWQTMSFRHSMYKRTFTNIQINLV---DVLEVDKENMTVRCEPLVTMG 486
K +CTAR W + R+ YKR + +++L ++LE+D+E M + EPLV MG
Sbjct: 79 PKKDGLVCTARKPWIAVGMRNVDYKRA-RHFEVDLSAFRNILEIDRERMVAKVEPLVNMG 137
Query: 487 QLSRTXXXXXXXXXXXXXXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVV 666
Q++R D L SH++GLF + E+VLADG VV
Sbjct: 138 QITRATCPMNLALAVVAELDDLTVGGLINGYGIEGSSHLYGLFSDTVVAVEVVLADGRVV 197
Query: 667 NCXKD-ENADLFYAVPWSYGTLGFLTSXVIKVIP 765
KD E +DLFY +PWS GTLGFL S IK+IP
Sbjct: 198 RATKDNEYSDLFYGIPWSQGTLGFLVSAEIKLIP 231
>02_02_0093 + 6692957-6693536,6693671-6694077,6694198-6694785
Length = 524
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +1
Query: 628 LEYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
LE +++ G +V C +D+++DLF+AV G G +T I ++PA
Sbjct: 187 LELDVITGTGDMVTCSRDKDSDLFFAVLGGLGQFGIITRARIGLMPA 233
>05_04_0094 +
17888998-17889589,17889668-17889795,17889879-17890139,
17890241-17890503,17890588-17890909
Length = 521
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 631 EYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
E E+V G V+ C ++N+DLF+A G G +T I + PA
Sbjct: 192 ELEIVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPA 237
>02_02_0092 +
6686658-6687246,6687343-6687749,6687875-6688378,
6688935-6688940
Length = 501
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 628 LEYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
LE +++ G +V C +D+ DLF+AV G G +T I + PA
Sbjct: 190 LELDVITGRGDMVTCSRDKEPDLFFAVLGGLGQFGIITRARIGLEPA 236
>01_07_0131 +
41292800-41293400,41293522-41293649,41293759-41294019,
41294154-41294416,41294507-41294831
Length = 525
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 631 EYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
+ E+V G VV C + N+DLFYA G G +T I + PA
Sbjct: 195 QLEIVTGRGEVVTCSHEVNSDLFYAALGGLGQFGIITRARIALEPA 240
>01_06_0894 -
32781957-32782287,32783019-32783284,32783771-32784040,
32785007-32785134,32785284-32785893
Length = 534
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 631 EYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
E ++V G VV C + N DLF+ G LG +T I + PA
Sbjct: 198 ELDVVTGKGEVVTCSESNNPDLFFGALGGLGQLGIITRARIALEPA 243
>01_01_0688 -
5267781-5267814,5269851-5270153,5270605-5270870,
5273319-5273785,5273877-5274501
Length = 564
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 628 LEYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
LE +++ G +V C K++ DLF AV G G +T I + PA
Sbjct: 202 LELDVITGVGEMVTCSKEKAPDLFDAVLGGLGQFGVITRARIPLAPA 248
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 613 FQHVCLEYELVLAD-GSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
F+H+ L ++ + G V C K N+DLF AV G G +T + V PA
Sbjct: 34 FEHIFLPQDMSQSGHGETVTCSKAVNSDLFDAVLGGLGQFGVITRARVAVEPA 86
>06_03_0532 -
21844213-21844252,21844579-21844836,21845303-21845568,
21845963-21846369,21846528-21847143
Length = 528
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 631 EYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
E ++V G ++ C + N+ LF+AV G G +T I++ PA
Sbjct: 200 ELDVVTGMGEMITCSPEVNSALFFAVLGGLGQFGVITRARIRLEPA 245
>08_02_0917 -
22609543-22609852,22609925-22610266,22610596-22610858,
22611318-22612349
Length = 648
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 631 EYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLTSXVIKVIPA 768
+ E+V DG C + + DLF+AV G G +T I + PA
Sbjct: 173 QLEVVTGDGECHVCSRSADPDLFFAVLGGLGQFGVITRARIPLSPA 218
>04_04_0548 +
26172595-26173189,26173346-26173473,26173606-26173866,
26173988-26174250,26176748-26177099
Length = 532
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 628 LEYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLT 741
L+ E+V G VV C E +LF+AV G G +T
Sbjct: 192 LQLEVVTGKGEVVTCSPTEIPELFFAVLGGLGQFGIIT 229
>10_08_0414 +
17755427-17756000,17756181-17756308,17756434-17756694,
17756774-17757036,17758662-17759019
Length = 527
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 628 LEYELVLADGSVVNCXKDENADLFYAVPWSYGTLGFLT 741
L+ E+V G +V C ++A+LF AV G G +T
Sbjct: 185 LQLEVVTGRGEIVTCSPTKDAELFNAVLGGLGQFGIIT 222
>04_04_0106 +
22823781-22823878,22824887-22825325,22825578-22825729,
22825828-22825999
Length = 286
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 157 RWVIVILALLPMSAAWKLWSIIRNYVVFK 243
RW I +ALL SA W LW I+++ + K
Sbjct: 103 RWAIGSVALLGGSACWSLWFILQSRIAKK 131
>04_03_0930 -
20891334-20891511,20891958-20892109,20892737-20893169,
20893592-20893708,20894099-20894196
Length = 325
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 157 RWVIVILALLPMSAAWKLWSIIRNYVVFK 243
RW I +ALL SA W LW I+++ + K
Sbjct: 140 RWAIGSVALLGGSACWSLWFILQSRIARK 168
>05_03_0684 - 16944937-16945959,16946074-16946469,16948055-16948330
Length = 564
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 596 DVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS*PI 480
D V +PVP+ P + N G + P G+ + D P+
Sbjct: 431 DSVVSPVPVEPSPNTNQGNCGAVAHSHPGGSIIHDRYPV 469
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 464 QRTVIFSLSTSKTSTRLICMLVNVL-LYMLCRKDIVCHVGRAVQR*VDLSPDNHSFICL* 288
+ +V+ L T+ C L L +C + V H+ +LS +S IC
Sbjct: 238 EASVLKYLKFEMTAPTTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYV 297
Query: 287 TSLTLSSCIFGALFILNTT 231
SL +S IF A FIL T
Sbjct: 298 PSLIAASSIFLAKFILKPT 316
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 385 YKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSR 498
Y+R F+ I + + LE D + VRC P V +G SR
Sbjct: 272 YRRIFSQISRHDIVDLEKDDDRGVVRCYPHVVVGYGSR 309
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 605 WTCDVVSTPVPITRPPTVSWSNSGTTGSAKPS 510
W + P P+ R P+ SWS++ S +PS
Sbjct: 299 WASQPSAAPSPVIRTPSASWSSAICLPSPQPS 330
>12_02_0071 + 13207111-13207280,13208100-13208251,13208728-13208903
Length = 165
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 575 GPAWRQHRTSTGFFSMCAWSTSWFSPTALSLTVXRTKTLIYFTLFRGL 718
G WR S G ++ W +WFSP L+ L T+F+G+
Sbjct: 40 GGRWRHD--SGGLRALSPWRWTWFSPETLAKRRYLGSALRRVTVFKGV 85
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 665 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVS 549
TT P+A T + T +P + +TP P PPT S
Sbjct: 53 TTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKS 91
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 429 LGGGQREYDSPLRASSDDGSAVP---HIGAARLGAARCS 536
LGGG+ E P +S DG V +G RL RCS
Sbjct: 133 LGGGELENAGPAHSSGRDGGEVEGLIEMGRLRLPPRRCS 171
>04_04_0517 + 25841292-25842099,25842256-25842308
Length = 286
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 603 PRAFSACVPGVRAGSRRRLCR*LX*GRKR*SILRCSVVLRHPWI 734
PR FS P + RR +CR + +R S VLRHPWI
Sbjct: 237 PRLFSGVSPAAKDLMRRMMCRDVY---RRFS---AEQVLRHPWI 274
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,604,781
Number of Sequences: 37544
Number of extensions: 422278
Number of successful extensions: 1206
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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