Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D15
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 89 5e-18
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 84 2e-16
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 84 2e-16
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 83 6e-16
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 83 6e-16
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 83 6e-16
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 83 6e-16
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 83 6e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 78 2e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 77 2e-14
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 77 2e-14
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 77 4e-14
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 75 9e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 75 9e-14
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 72 8e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 71 2e-12
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 69 6e-12
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 69 6e-12
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 69 6e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 66 4e-11
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 66 5e-11
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 63 4e-10
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 61 2e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 59 6e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 56 6e-08
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 35 0.15
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 89.4 bits (212), Expect = 5e-18
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 1/166 (0%)
Frame = +3
Query: 288 IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYS 467
I +++I++ K++ +KK+ + YLA I+N + FP K +
Sbjct: 437 IRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMA 496
Query: 468 KIIPLFKSGSTFD-PTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTXGR 644
I+ + K G + P ++RPIS+L +LSK++E++I +L + +L + Q+GF G
Sbjct: 497 AILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGH 556
Query: 645 STIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVEHNTLLRKL 782
ST++ L K+I QA+++ VF D+ +AFD V H+ L+ K+
Sbjct: 557 STVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKV 602
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 84.2 bits (199), Expect = 2e-16
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Frame = +3
Query: 288 IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYS 467
+ ++ K ++ +K+ + G ++ I N C+ G FP K +
Sbjct: 461 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 520
Query: 468 KIIPLFKSGSTFD-PTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTXGR 644
KI+P+ K G D P ++RPIS+L LSKI EK+I +L+ +N L QYGF G
Sbjct: 521 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 580
Query: 645 STIDAGVDLIKNIFQAWEESHNALG-VFCDLSKAFDCVEHNTLLRKLXHYG 794
+TI + L +N + +S ++G V D+ AFD V H+ LL KL G
Sbjct: 581 NTILPTLKL-RNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIG 630
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 84.2 bits (199), Expect = 2e-16
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 2/171 (1%)
Frame = +3
Query: 288 IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYS 467
+ ++ K ++ +K+ + G ++ I N C+ G FP K +
Sbjct: 409 VTYPEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIA 468
Query: 468 KIIPLFKSGSTFD-PTNFRPISVLPTLSKIFEKIILEQLLNHFYSNNLLHNKQYGFTXGR 644
KI+P+ K G D P ++RPIS+L LSKI EK+I +L+ +N L QYGF G
Sbjct: 469 KIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGL 528
Query: 645 STIDAGVDLIKNIFQAWEESHNALG-VFCDLSKAFDCVEHNTLLRKLXHYG 794
+TI + L +N + +S ++G V D+ AFD V H+ LL KL G
Sbjct: 529 NTILPTLKL-RNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIG 578
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 82.6 bits (195), Expect = 6e-16
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 222 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 395
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 344 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKA 400
Query: 396 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIIL 572
YL I+N + G +PD K++++ + K G S DP ++RPIS+L LSK+FE+++L
Sbjct: 401 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLL 460
Query: 573 EQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDC 752
++L + Q+GF T + + I +A+E VF D+S+AFD
Sbjct: 461 KRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDR 520
Query: 753 VEHNTLLRKL 782
V H LL KL
Sbjct: 521 VWHEGLLLKL 530
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 6e-16
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 222 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 395
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 460 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKA 516
Query: 396 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIIL 572
YL I+N + G +PD K++++ + K G S DP ++RPIS+L LSK+FE+++L
Sbjct: 517 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLL 576
Query: 573 EQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDC 752
++L + Q+GF T + + I +A+E VF D+S+AFD
Sbjct: 577 KRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDR 636
Query: 753 VEHNTLLRKL 782
V H LL KL
Sbjct: 637 VWHEGLLLKL 646
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 6e-16
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 222 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 395
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 460 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKA 516
Query: 396 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIIL 572
YL I+N + G +PD K++++ + K G S DP ++RPIS+L LSK+FE+++L
Sbjct: 517 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLL 576
Query: 573 EQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDC 752
++L + Q+GF T + + I +A+E VF D+S+AFD
Sbjct: 577 KRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDR 636
Query: 753 VEHNTLLRKL 782
V H LL KL
Sbjct: 637 VWHEGLLLKL 646
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 82.6 bits (195), Expect = 6e-16
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 222 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 395
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 422 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKA 478
Query: 396 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIIL 572
YL I+N + G +PD K++++ + K G S DP ++RPIS+L LSK+FE+++L
Sbjct: 479 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLL 538
Query: 573 EQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDC 752
++L + Q+GF T + + I +A+E VF D+S+AFD
Sbjct: 539 KRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDR 598
Query: 753 VEHNTLLRKL 782
V H LL KL
Sbjct: 599 VWHEGLLLKL 608
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 82.6 bits (195), Expect = 6e-16
Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Frame = +3
Query: 222 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 395
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 460 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKA 516
Query: 396 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIIL 572
YL I+N + G +PD K++++ + K G S DP ++RPIS+L LSK+FE+++L
Sbjct: 517 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLL 576
Query: 573 EQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDC 752
++L + Q+GF T + + I +A+E VF D+S+AFD
Sbjct: 577 KRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDR 636
Query: 753 VEHNTLLRKL 782
V H LL KL
Sbjct: 637 VWHEGLLLKL 646
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 77.8 bits (183), Expect = 2e-14
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQ 578
+L IFN + G FP K + II + K+G T D ++RPIS+LP+L KI E++IL +
Sbjct: 278 FLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNR 337
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
LL + Q+GF T + ++ +A E A+G F D+ +AFD V
Sbjct: 338 LLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVW 397
Query: 759 HNTLLRK 779
H LL K
Sbjct: 398 HPGLLYK 404
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 77.4 bits (182), Expect = 2e-14
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQ 578
+LA IFN + G FP K + II + K+G T D ++RP S+LP+L KI E++IL +
Sbjct: 476 FLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNR 535
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
LL + Q+GF T + ++ +A E A+G F D+ +AFD V
Sbjct: 536 LLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVW 595
Query: 759 HNTLLRK 779
H LL K
Sbjct: 596 HPGLLYK 602
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 77.4 bits (182), Expect = 2e-14
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N + G +P+ K++++ + K G S+ +P ++RPIS+L LSK+FE+++L++
Sbjct: 531 YLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKR 590
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + Q+GF T + + I +A+E VF D+S+AFD V
Sbjct: 591 LFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVW 650
Query: 759 HNTLLRKL 782
H LL KL
Sbjct: 651 HEGLLLKL 658
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 76.6 bits (180), Expect = 4e-14
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N + G +P+ K++++ + K G S +P ++RPIS+L LSKIFE+++L++
Sbjct: 519 YLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKR 578
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + Q+GF + + + I +A+E VF D+S+AFD V
Sbjct: 579 LFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVW 638
Query: 759 HNTLLRKL 782
H LL KL
Sbjct: 639 HEGLLLKL 646
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 75.4 bits (177), Expect = 9e-14
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQ 578
++ +FN G FP K S I+ + K G P+++RPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
+ H NN L Q+GF TI+ + I A+E +F D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVW 589
Query: 759 HNTLLRKL 782
+ LL K+
Sbjct: 590 LDGLLFKI 597
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 75.4 bits (177), Expect = 9e-14
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQ 578
++ +FN G FP K S I+ + K G P+++RPIS+L LSK+FEK++L +
Sbjct: 470 HICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLR 529
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
+ H NN L Q+GF TI+ + I A+E +F D+++AFD V
Sbjct: 530 ISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVW 589
Query: 759 HNTLLRKL 782
+ LL K+
Sbjct: 590 LDGLLFKI 597
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 72.1 bits (169), Expect = 8e-13
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTFD-PTNFRPISVLPTLSKIFEKIILEQ 578
Y+ +FN G FP K KII + K G +++RPIS+L +SK+FEK +L +
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIR 531
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L H +N++ Q+GF TI+ + I A+E VF D+S+AFD V
Sbjct: 532 LNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVW 591
Query: 759 HNTLLRKL 782
+ L+ K+
Sbjct: 592 LDGLMFKI 599
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 70.9 bits (166), Expect = 2e-12
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTF-DPTNFRPISVLPTLSKIFEKIILEQ 578
Y+ +FN + FP K I + K G +P ++RPIS+LP++SK+FE++I +
Sbjct: 474 YITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVR 533
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
+++ + + Q+GF G T++ +++ I A++ +F D+ +AFD V
Sbjct: 534 IVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVW 593
Query: 759 HNTLLRKL 782
H L K+
Sbjct: 594 HIGLQLKI 601
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 69.3 bits (162), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N+ + G FP+ K++ I + K G S F ++RPIS+L LSK+ E+I+L++
Sbjct: 75 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 134
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + + + Q+GF + + I +A++E F D+++AFD V
Sbjct: 135 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 194
Query: 759 HNTLLRKL 782
H+ LL KL
Sbjct: 195 HDGLLYKL 202
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 69.3 bits (162), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N+ + G FP+ K++ I + K G S F ++RPIS+L LSK+ E+I+L++
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + + + Q+GF + + I +A++E F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 759 HNTLLRKL 782
H+ LL KL
Sbjct: 642 HDGLLYKL 649
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 69.3 bits (162), Expect = 6e-12
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N+ + G FP+ K++ I + K G S F ++RPIS+L LSK+ E+I+L++
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + + + Q+GF + + I +A++E F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 759 HNTLLRKL 782
H+ LL KL
Sbjct: 642 HDGLLYKL 649
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.5 bits (155), Expect = 4e-11
Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDPTNFRPISVLPTLSKIFEKIILEQ 578
YL I+N+ + G FP+ K++ I + K G S F ++RPIS+L LSK+ E+I+ ++
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKR 581
Query: 579 LLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVE 758
L + + + Q+GF + + I +A++E F D+++AFD V
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 759 HNTLLRKL 782
H+ LL KL
Sbjct: 642 HDGLLYKL 649
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 66.1 bits (154), Expect = 5e-11
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Frame = +3
Query: 405 LATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTN-FRPISVLPTLSKIFEKIILEQL 581
+ +FN+ I+N P K S IIP+ K + T+ +RPIS+ ++KI +KII ++L
Sbjct: 471 ITKLFNE-IFNSHIPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRL 529
Query: 582 LNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVEH 761
NNL+++KQ+GF G+ST D L + + H +L V D S+AFD V
Sbjct: 530 WWLVTYNNLINDKQFGFKKGKSTSDC--LLYVDYLITKSKMHTSL-VTLDFSRAFDRVGV 586
Query: 762 NTLLRKLXHY 791
++++++L +
Sbjct: 587 HSIIQQLQEW 596
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 63.3 bits (147), Expect = 4e-10
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Frame = +3
Query: 405 LATIFNDCIYNGVFPDLMKYSKIIPLFKSGST-FDPTNFRPISVLPTLSKIFEKIILEQL 581
L IFN + G +P + + IIP+ K D ++RPIS+L L K EKII ++L
Sbjct: 475 LLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRL 534
Query: 582 LNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVEH 761
+NL+ + Q F ST+DA + + A ++ + D +AFD V
Sbjct: 535 TWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGI 594
Query: 762 NTLLRKLXHYGI 797
+ +L +L +GI
Sbjct: 595 HAVLCRLERWGI 606
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 60.9 bits (141), Expect = 2e-09
Identities = 39/126 (30%), Positives = 63/126 (50%)
Frame = +3
Query: 405 LATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLL 584
+ +FN G FP K S II + K ++RPIS+L LSK+FEK +L ++
Sbjct: 13 ICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRIS 72
Query: 585 NHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVEHN 764
H ++N L + Q+ F I+ + I A+E +F D+++AFD V +
Sbjct: 73 PHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLD 132
Query: 765 TLLRKL 782
L+ K+
Sbjct: 133 GLMFKI 138
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 59.3 bits (137), Expect = 6e-09
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 417 FNDCIYNGVFPDLMKYSKIIPLFKS-GSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHF 593
F C+ +GVFP K K++ L K G P ++RP+ +L + K+FE+I+ ++
Sbjct: 445 FQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELIT 504
Query: 594 YSNNLLHNKQYGFTXGRSTIDA 659
S L +QYGF G+ST+DA
Sbjct: 505 ESPTGLQGQQYGFRKGKSTLDA 526
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 56.0 bits (129), Expect = 6e-08
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 402 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGST--FDPTNFRPISVLPTLSKIFEKIILE 575
+LA++F+ CI G FP K +++ L K +P+++R I +LP K+ E I++
Sbjct: 472 HLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVN 531
Query: 576 QLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCV 755
++ Q+GF GR DA + ++ + + LG F D AFD V
Sbjct: 532 RVREVLPEGC---RWQFGFRQGRCVEDAWRHVKSSVGAS--AAQYVLGTFVDFKGAFDNV 586
Query: 756 EHNTLLRKLXHYGIR 800
E + L +L G R
Sbjct: 587 EWSAALSRLADLGCR 601
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 34.7 bits (76), Expect = 0.15
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +3
Query: 414 IFNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHF 593
I N ++ G P ++ ++ + + K+ + P +FRPISV L + I+ +L
Sbjct: 381 IMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILATRL---- 436
Query: 594 YSNNLLHNKQYGF--TXGRSTIDAGVDLIKNIFQAWEESHNALGVFCDLSKAFDCVEHNT 767
S+ +Q GF T G + VDL+ + + + + D+SKAFD + H +
Sbjct: 437 NSSINWDPRQRGFLPTDGCADNATIVDLV--LRHSHKHFRSCYIANLDVSKAFDSLSHAS 494
Query: 768 LLRKLXHYG 794
+ L YG
Sbjct: 495 IYDTLRAYG 503
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,563,813
Number of Sequences: 53049
Number of extensions: 594160
Number of successful extensions: 1250
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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