Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D15
(805 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 63 3e-10
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 63 3e-10
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 29 3.9
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 5.1
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 29 5.1
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 5.1
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 5.1
U88184-4|AAK31518.1| 96|Caenorhabditis elegans Hypothetical pr... 28 6.8
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 9.0
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 9.0
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 9.0
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 28 9.0
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 9.0
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 62.9 bits (146), Expect = 3e-10
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 417 FNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFY 596
FN +++ P K SK +FK G + N+RPI +LP L K+F K +L ++
Sbjct: 419 FNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL- 477
Query: 597 SNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALG-VFCDLSKAFDCVEHNTLL 773
+ +Q GF STID + ++ + + E L VF D KAFD VEH +
Sbjct: 478 -DEAQPVEQAGFRRSFSTID-HIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQAIW 535
Query: 774 RKLXHYGIRG 803
+ L G G
Sbjct: 536 KSLDEQGADG 545
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 62.9 bits (146), Expect = 3e-10
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 417 FNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFY 596
FN +++ P K SK +FK G + N+RPI +LP L K+F K +L ++
Sbjct: 590 FNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL- 648
Query: 597 SNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALG-VFCDLSKAFDCVEHNTLL 773
+ +Q GF STID + ++ + + E L VF D KAFD VEH +
Sbjct: 649 -DEAQPVEQAGFRRSFSTID-HIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIW 706
Query: 774 RKLXHYGIRG 803
+ L G G
Sbjct: 707 KSLDEQGADG 716
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 62.9 bits (146), Expect = 3e-10
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 417 FNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPTNFRPISVLPTLSKIFEKIILEQLLNHFY 596
FN +++ P K SK +FK G + N+RPI +LP L K+F K +L ++
Sbjct: 329 FNRYLHSRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL- 387
Query: 597 SNNLLHNKQYGFTXGRSTIDAGVDLIKNIFQAWEESHNALG-VFCDLSKAFDCVEHNTLL 773
+ +Q GF STID + ++ + + E L VF D KAFD VEH +
Sbjct: 388 -DEAQPVEQAGFRRSFSTID-HIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIW 445
Query: 774 RKLXHYGIRG 803
+ L G G
Sbjct: 446 KSLDEQGADG 455
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 720 VFCDLSKAFDCVEHNTLLRKLXHYG 794
VF D KAFD VEH + + L G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQG 64
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -3
Query: 446 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 267
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 266 TAF 258
+F
Sbjct: 299 DSF 301
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -3
Query: 446 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 267
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 233 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 290
Query: 266 TAF 258
+F
Sbjct: 291 DSF 293
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -3
Query: 446 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 267
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 266 TAF 258
+F
Sbjct: 299 DSF 301
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -3
Query: 446 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 267
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 266 TAF 258
+F
Sbjct: 299 DSF 301
>U88184-4|AAK31518.1| 96|Caenorhabditis elegans Hypothetical
protein F36H5.9 protein.
Length = 96
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 549 KIFEKIILEQLLNHFYSNNLLHNKQYGFTXGRSTIDAGVDL 671
KIF++ I ++ NH + HN +GF G + + G+++
Sbjct: 44 KIFDRKIYIEVQNHVHVILDTHNCSFGFNCGTTDRNVGIEI 84
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 111 LQINAKXITSHQAVASAFXRYFADIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTN 287
LQ+ K S QA+ F Y D PA T +++ T S+ EC + F+F +
Sbjct: 199 LQMVFKSSASRQAMGFNFS-YSIDCPAFPTVPMVTLSTKQRSVNTKVTVECPIGFEFAS 256
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 180 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 347
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 180 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 347
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 738 KAFDCVEHNTLLRKLXHYGI 797
KAFD V H+ LL+KL +GI
Sbjct: 2 KAFDQVNHSLLLQKLHDFGI 21
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 180 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 347
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,524,964
Number of Sequences: 27780
Number of extensions: 320481
Number of successful extensions: 804
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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