Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D14
         (790 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0047 + 40731508-40731714,40731834-40731893,40731992-407321...    47   1e-05
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    29   4.2  
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446...    28   9.7  
08_01_0647 + 5596338-5596423,5597442-5597550,5598450-5598579,559...    28   9.7  

>01_07_0047 +
           40731508-40731714,40731834-40731893,40731992-40732159,
           40732198-40732203,40732898-40732961,40733395-40733690,
           40733799-40733903,40734030-40734066,40734309-40734403,
           40735226-40735282,40735361-40735438,40735527-40735586
          Length = 410

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/75 (30%), Positives = 39/75 (52%)
 Frame = +2

Query: 203 DKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVD 382
           D+++   +VP G    F G +IHTNE+ V LG  Y+ + S KQ   +   R  + E +V+
Sbjct: 62  DEVSHDIMVPFGGAAFFPGRLIHTNELLVLLGEGYYVERSAKQTTEILHRRGMELEAQVE 121

Query: 383 MYEKEYDYLKSQIAF 427
             +     L+++  F
Sbjct: 122 AMKATISDLEAEAKF 136


>10_01_0307 +
           3382432-3382608,3382690-3382863,3383600-3383695,
           3384640-3384709,3385878-3386002,3387128-3387268,
           3387362-3387519,3387644-3387803,3390136-3390213,
           3390326-3390385,3390473-3390528,3391886-3392090,
           3394107-3394192,3394296-3394406,3394536-3394607,
           3395453-3395538,3395730-3395878,3396107-3396250,
           3396335-3396442,3396997-3397027,3397609-3397713,
           3398283-3398407,3398807-3398950,3399073-3399177,
           3400748-3400799,3401549-3401696,3401936-3402130,
           3402404-3402647,3403152-3403259,3403887-3404034,
           3405467-3405525,3405876-3405945,3407008-3407333,
           3407666-3409204,3410526-3410733,3410870-3410906,
           3411024-3411072,3411143-3411271
          Length = 2025

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -3

Query: 446 HKCFHC*MLFDFSDNHILFRTYLLWFQHLLFYVVLI-SRLVSTNTWQNNRPLKKP 285
           H C    +L +FS   I  RT +++   L F  +L  S    +N+  NNR   KP
Sbjct: 786 HSCNIIDVLSEFSQPSIEMRTCIIFHLQLAFIKILSQSHYACSNSEDNNRTSNKP 840


>11_04_0301 +
           16142236-16142945,16143748-16144247,16144557-16144649,
           16144879-16145005,16145265-16145468,16145587-16145692
          Length = 579

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 360 FILCCFNISACFNEHLAK*SAPKETVISFVCIISPLNNIR 241
           F+LCC     CF   +A  + P    ++ VC+ S L N+R
Sbjct: 516 FLLCCHTALNCFPAAVAPLTLP----LNCVCMFSHLKNVR 551


>08_01_0647 +
           5596338-5596423,5597442-5597550,5598450-5598579,
           5599241-5600016,5600342-5600497,5600627-5600722
          Length = 450

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +2

Query: 26  KVSQHPPRVSFLSQPVPSIKAMHFLTALXVKRLAAHAKHLQFWVNYLKXLRALDLNVF 199
           K   HP     +S+ +P+    H ++ L ++     +    +WVN    L+++ LN++
Sbjct: 121 KEHSHPYEKDMISK-LPNDLVQHIMSFLSMREAVRTSVLSHWWVNQWTFLKSIQLNIY 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,014
Number of Sequences: 37544
Number of extensions: 246679
Number of successful extensions: 597
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)